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1202 2923d 02h werner /branches/iland_regen/src/ searching/fixing issues with carbon cycle: NEP as provided by carbonflow output (NPP-Rh-Mgmt) is different from NEP as derived by the delta of the carbon stocks.
As usual, very hard to track down these issues, but:
* bark beetle module: foliage loss from BB-trees now correctly routed to soil
* order of modules in model: switched disturbances and carbon cylcle (in order to correctly track all carbon changes due to disturbances)
* fixed a problem with the calculation of NPP: after disturbances stand level NPP was set to 0 (since statistics were recalculated after disturbaces, but NPP values are not available then). Introduced: StandStatistics::clearOnlyTrees()
* flow from branches to the atmosphere (decay of branches) now tracked correctly (changes the NEP calulation).
 
1164 3088d 03h werner /branches/iland_regen/src/ found unexpected behavior of irandom(): obviously, it return *never* the upper bound.
eg. irandom(0,3) -> values 0,1, or 2, but never 3.
changed calls to irandom() accordingly.
added also a better random selection of species in the establishment routine
 
1157 3090d 11h werner /branches/iland_regen/ merge of changes in the trunk (up to the version used for the 2016 DICE simulation batch).  
1104 3160d 09h werner /branches/iland_regen/ Branch dedicated to playing around with establishment/regeneration.
Goals are:
(i) speed up
(ii) introduction of new features for Yellowstone
 
1095 3185d 02h werner /branches/port_qt5_64bit/ Adding basic C++ level documentation for ABE classes.  
1092 3209d 09h werner /branches/port_qt5_64bit/src/plugins/barkbeetle/ improved comments during final checkup of the model against the paper appendix.  
1086 3234d 01h werner /branches/port_qt5_64bit/src/plugins/barkbeetle/ added new "killed" grid to the BB module.  
1085 3235d 02h werner /branches/port_qt5_64bit/src/ working on barkbeetle module (fixing problems, some small modifications, ...)
improving the JS-based spatial analysis toolkit.
 
1082 3238d 01h werner /branches/port_qt5_64bit/src/ remove out-of-project area from GrassCover
fixed error in calculating the number of bark beetle generations (and changed the handling of sister broods)
 
1081 3242d 01h werner /branches/port_qt5_64bit/src/ created a new javascript wrapper for the iLand "grid" class. This includes some processing (e.g. calculate using expressions), and some function to retrieve grids from iLand (e.g. damage data from disturbance modules, height grid).
fancy!
 
1077 3251d 07h werner /branches/port_qt5_64bit/src/ implemented stormInfestationProbability in bark beetle module.
added path() function in Globals JS object.
 
1070 3270d 02h werner /branches/port_qt5_64bit/src/ bark-beetle wind interaction, now working ...  
1068 3270d 10h werner /branches/port_qt5_64bit/src/ some optimizations for grass / establishment
START
 
1066 3271d 08h werner /branches/port_qt5_64bit/src/ wind-bark-beetle interaction, now functional
fixed this annoyance of the mixed-up species order in the UI.
 
1065 3271d 22h werner /branches/port_qt5_64bit/src/ interaction of bark beetle and wind disturbances.  
1064 3273d 03h werner /branches/port_qt5_64bit/src/ many changes. Most notably:
* improvements in the grass-cover sub Modules
* interaction between wind and bark beetle
* javascript function to extract seed-distribution-maps
* fixed a bug when continuous seed input was assumed
 
1057 3290d 11h werner /branches/port_qt5_64bit/src/ added outbreak duration in bark beetle module  
1055 3293d 06h werner /branches/port_qt5_64bit/src/ working on new iteration of the bark beetle module.
adding a kind of splash screen to iland.
 
1054 3294d 02h werner /branches/port_qt5_64bit/ next iteration of the barkbeetle Modules
added background image to the iland viewer
some update of the wind-module as well (new wind output, for example)
 
1053 3306d 10h werner /branches/port_qt5_64bit/src/ updates for Qt 5.5 and GCC (Linux).  

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