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697 4599d 00h werner /trunk/ Doxygen documentation revisited.
After re-establishing doxygen documentation (last update: 2009) a lot of smaller/medium documentation fixes.
Documentation is something that could definitely be always improved ;)		  
/trunk/doc
/trunk/doc/iland_doxyfile.doxy
/trunk/src/core/environment.cpp
/trunk/src/core/grid.h
/trunk/src/core/layeredgrid.h
/trunk/src/core/management.cpp
/trunk/src/core/model.cpp
/trunk/src/core/modelcontroller.cpp
/trunk/src/core/phenology.cpp
/trunk/src/core/production3pg.cpp
/trunk/src/core/resourceunit.cpp
/trunk/src/core/resourceunitspecies.cpp
/trunk/src/core/sapling.cpp
/trunk/src/core/seeddispersal.cpp
/trunk/src/core/snag.cpp
/trunk/src/core/soil.cpp
/trunk/src/core/species.cpp
/trunk/src/core/speciesresponse.cpp
/trunk/src/core/speciesset.cpp
/trunk/src/core/stamp.h
/trunk/src/core/stampcontainer.h
/trunk/src/core/standloader.cpp
/trunk/src/core/standstatistics.cpp
/trunk/src/core/tree.cpp
/trunk/src/core/watercycle.cpp
/trunk/src/core/watercycle.h
/trunk/src/iland/maindoc.cpp
/trunk/src/plugins/fire/firemodule.cpp
/trunk/src/plugins/fire/firemodule.h
/trunk/src/plugins/fire/firescript.cpp
/trunk/src/tools/csvfile.cpp
/trunk/src/tools/dem.h
/trunk/src/tools/expressionwrapper.cpp
/trunk/src/tools/gisgrid.cpp
/trunk/src/tools/mapgrid.cpp
/trunk/src/tools/scriptglobal.cpp
/trunk/src/tools/sqlhelper.cpp
680 4634d 07h werner /trunk/ Version 0.7.1
Several improvements/fixes in the Fire module, inter alia:
* fire size distribution
* handling of burning snags
* improved scripting support (export spread pattern als ESRI grid)
* fix in watercylce for kbdi-calculation		  
/trunk/executable/iland.exe
/trunk/executable/ilandc.exe
/trunk/src/core/grid.h
/trunk/src/core/watercycle.cpp
/trunk/src/iland/version.cpp
/trunk/src/plugins/fire/firemodule.cpp
/trunk/src/plugins/fire/firemodule.h
/trunk/src/plugins/fire/fireout.cpp
/trunk/src/plugins/fire/firescript.cpp
/trunk/src/plugins/fire/firescript.h
/trunk/src/tools/scriptglobal.cpp
671 4642d 04h werner /trunk/src/ Necessary changes for GPL licence (i.e. headers in all source files)  
/trunk/src/core/climate.cpp
/trunk/src/core/climate.h
/trunk/src/core/environment.cpp
/trunk/src/core/environment.h
/trunk/src/core/establishment.cpp
/trunk/src/core/establishment.h
/trunk/src/core/exception.h
/trunk/src/core/global.h
/trunk/src/core/grid.h
/trunk/src/core/layeredgrid.h
/trunk/src/core/management.cpp
/trunk/src/core/management.h
/trunk/src/core/model.cpp
/trunk/src/core/model.h
/trunk/src/core/modelcontroller.cpp
/trunk/src/core/modelcontroller.h
/trunk/src/core/modelsettings.cpp
/trunk/src/core/modelsettings.h
/trunk/src/core/phenology.cpp
/trunk/src/core/phenology.h
/trunk/src/core/plugin_interface.h
/trunk/src/core/production3pg.cpp
/trunk/src/core/production3pg.h
/trunk/src/core/resourceunit.cpp
/trunk/src/core/resourceunit.h
/trunk/src/core/sapling.cpp
/trunk/src/core/sapling.h
/trunk/src/core/seeddispersal.cpp
/trunk/src/core/seeddispersal.h
/trunk/src/core/snag.cpp
/trunk/src/core/snag.h
/trunk/src/core/soil.cpp
/trunk/src/core/soil.h
/trunk/src/core/species.cpp
/trunk/src/core/species.h
/trunk/src/core/speciesresponse.cpp
/trunk/src/core/speciesresponse.h
/trunk/src/core/speciesset.cpp
/trunk/src/core/speciesset.h
/trunk/src/core/stamp.cpp
/trunk/src/core/stamp.h
/trunk/src/core/stampcontainer.cpp
/trunk/src/core/stampcontainer.h
/trunk/src/core/standloader.cpp
/trunk/src/core/standloader.h
/trunk/src/core/standstatistics.cpp
/trunk/src/core/standstatistics.h
/trunk/src/core/threadrunner.cpp
/trunk/src/core/threadrunner.h
/trunk/src/core/timeevents.cpp
/trunk/src/core/timeevents.h
/trunk/src/core/tree.cpp
/trunk/src/core/tree.h
/trunk/src/core/watercycle.cpp
/trunk/src/core/watercycle.h
/trunk/src/iland/aboutdialog.cpp
/trunk/src/iland/aboutdialog.h
/trunk/src/iland/aboutdialog.ui
/trunk/src/iland/mainwindow.cpp
/trunk/src/iland/mainwindow.h
/trunk/src/iland/paintarea.cpp
/trunk/src/iland/paintarea.h
/trunk/src/iland/stable.h
/trunk/src/iland/tests.cpp
/trunk/src/iland/tests.h
/trunk/src/iland/version.h
/trunk/src/output/carbonflowout.cpp
/trunk/src/output/carbonflowout.h
/trunk/src/output/carbonout.cpp
/trunk/src/output/carbonout.h
/trunk/src/output/dynamicstandout.cpp
/trunk/src/output/dynamicstandout.h
/trunk/src/output/managementout.cpp
/trunk/src/output/managementout.h
/trunk/src/output/output.cpp
/trunk/src/output/output.h
/trunk/src/output/outputmanager.cpp
/trunk/src/output/outputmanager.h
/trunk/src/output/productionout.cpp
/trunk/src/output/productionout.h
/trunk/src/output/saplingout.cpp
/trunk/src/output/saplingout.h
/trunk/src/output/standdeadout.cpp
/trunk/src/output/standdeadout.h
/trunk/src/output/standout.cpp
/trunk/src/output/standout.h
/trunk/src/output/treeout.cpp
/trunk/src/output/treeout.h
/trunk/src/plugins/fire/firemodule.cpp
/trunk/src/plugins/fire/firemodule.h
/trunk/src/plugins/fire/fireout.cpp
/trunk/src/plugins/fire/fireout.h
/trunk/src/plugins/fire/fireplugin.cpp
/trunk/src/plugins/fire/fireplugin.h
/trunk/src/tools/climateconverter.cpp
/trunk/src/tools/climateconverter.h
/trunk/src/tools/csvfile.cpp
/trunk/src/tools/csvfile.h
/trunk/src/tools/dem.cpp
/trunk/src/tools/dem.h
/trunk/src/tools/expression.cpp
/trunk/src/tools/expression.h
/trunk/src/tools/expressionwrapper.cpp
/trunk/src/tools/expressionwrapper.h
/trunk/src/tools/floatingaverage.cpp
/trunk/src/tools/floatingaverage.h
/trunk/src/tools/gisgrid.cpp
/trunk/src/tools/gisgrid.h
/trunk/src/tools/globalsettings.cpp
/trunk/src/tools/globalsettings.h
/trunk/src/tools/helper.cpp
/trunk/src/tools/helper.h
/trunk/src/tools/mapgrid.cpp
/trunk/src/tools/mapgrid.h
/trunk/src/tools/modules.cpp
/trunk/src/tools/modules.h
/trunk/src/tools/random.cpp
/trunk/src/tools/random.h
/trunk/src/tools/scriptglobal.cpp
/trunk/src/tools/scriptglobal.h
/trunk/src/tools/settingmetadata.cpp
/trunk/src/tools/settingmetadata.h
/trunk/src/tools/sqlhelper.cpp
/trunk/src/tools/sqlhelper.h
/trunk/src/tools/ticktack.cpp
/trunk/src/tools/ticktack.h
/trunk/src/tools/xmlhelper.cpp
/trunk/src/tools/xmlhelper.h
646 4783d 05h werner /trunk/src/ reorganized the fire module code and other stuff.
* added new interfaces and linked some of them already (setup(), ...)
* separated the plugin from the implementation (fireplugin.h vs. FireModule)
* worked on finding a way to create "layeredgrids" (how to avoid the templates...)- i have a solution now but still not sure if it really works		  
/trunk/src/core/layeredgrid.h
/trunk/src/plugins/fire/firemodule.cpp
/trunk/src/plugins/fire/firemodule.h
/trunk/src/core/grid.h
/trunk/src/core/model.cpp
/trunk/src/core/model.h
/trunk/src/core/modelcontroller.cpp
/trunk/src/core/modelcontroller.h
/trunk/src/core/plugin_interface.h
/trunk/src/core/watercycle.cpp
/trunk/src/iland/iland.pro
/trunk/src/plugins/fire/fire.pro
/trunk/src/plugins/fire/fireplugin.cpp
/trunk/src/plugins/fire/fireplugin.h
/trunk/src/tools/gisgrid.cpp
/trunk/src/tools/gisgrid.h
/trunk/src/tools/modules.cpp
/trunk/src/tools/modules.h
639 4803d 01h werner / move current content to the "trunk"  
/trunk/executable
/trunk/src
/executable
/src
626 4854d 22h werner /src/core/ added some debug timers plus completed the executable directory (added the sqlite-plugin)  
/src/core/establishment.cpp
/src/core/resourceunit.cpp
/src/core/resourceunitspecies.cpp
/src/core/speciesresponse.cpp
/src/core/watercycle.cpp
621 4859d 08h werner /src/core/ * removed the temperature dependent calculation of e20 for the evapotranspiration,
* added some options to the project file (snow temperature, interception)		  
/src/core/watercycle.cpp
/src/core/watercycle.h
620 4859d 09h werner /src/core/ Modified canopy evaporation to incorporate Wigmosta et al (switching
from "wet" to "dry" canopy)		  
/src/core/watercycle.cpp
605 4872d 07h werner /src/ added the "rid" (i.e. a unique id per resource unit) in various debug outputs.
added the "shell" of a new carbonflow output.		  
/src/output/carbonflowout.cpp
/src/output/carbonflowout.h
/src/core/resourceunit.cpp
/src/core/resourceunitspecies.cpp
/src/core/snag.cpp
/src/core/speciesresponse.cpp
/src/core/watercycle.cpp
/src/iland/iland.pro
/src/output/outputmanager.cpp
/src/tools/globalsettings.cpp
572 4906d 06h werner /src/ * be more generous with the names in the header of ESRI-style gis grids (case sensitivity)
* allow subtle difference for the sum of sand/clay/silt (rounding errors)		  
/src/core/watercycle.cpp
/src/tools/gisgrid.cpp
566 4910d 09h werner /src/ extended management: modify carbon content of soil / swd pools.
slightly modifications to the CSVFile JS API (value(row, name)-function).		  
/src/core/management.cpp
/src/core/management.h
/src/core/snag.h
/src/core/soil.cpp
/src/core/soil.h
/src/core/watercycle.cpp
/src/tools/csvfile.h
562 4917d 04h werner /src/ calculate ET0 (reference evapotranspiration) that is used for snag decay 're'. Another version of penman monteith is used for calculation.
See the excel - based "re_decomp.xlsx" for details		  
/src/core/snag.cpp
/src/core/watercycle.cpp
/src/core/watercycle.h
/src/iland/tests.cpp
561 4917d 07h werner /src/core/ update of the watercycle:
* changed the calc. of svp-slope (saturated vapor pressure) from homebrewn derivation to FAO code (Allen et al).
* use now "net radiation" instead of global radiation. "net rad" is calculated from a linear estimation with fixed coefficients (source: 3pg)
The results show only very little differences (e.g.: base version: yearly et: 698mm, after updates: 666mm). (see penman-monteith_2011_test.xls)		  
/src/core/watercycle.cpp
554 4922d 04h werner / new version - somewhat intermediate.
contains the *next* version of 're' calculation and seems to have still problems with the PET calculation. This version is solely for testing purposes.		  
/executable/iland.exe
/src/core/watercycle.cpp
/src/core/watercycle.h
/src/iland/version.cpp
553 4922d 05h werner /src/core/ another variant to calculate 're', following Adair et al 2008. Based on monthly sums of precipitation and PET. PET is calculated during the water cycle, monthly precipitation is summed in the climate object itself.  
/src/core/climate.cpp
/src/core/climate.h
/src/core/snag.cpp
/src/core/watercycle.cpp
/src/core/watercycle.h
547 4924d 06h werner /src/core/ restructured the topLayerWaterContent setting; it is now RU-specific (and not a global parameter)  
/src/core/modelsettings.cpp
/src/core/modelsettings.h
/src/core/snag.cpp
/src/core/watercycle.cpp
/src/core/watercycle.h
546 4924d 08h werner /src/core/ modified calculation of 're' (decay rate for snags), and added new model setting ('topLayerWaterContent') for that purpose. New variable 'waterDeficit' per day in WaterCycle.  
/src/core/modelsettings.cpp
/src/core/modelsettings.h
/src/core/snag.cpp
/src/core/watercycle.cpp
/src/core/watercycle.h
540 4949d 05h werner /src/ removed the storage of rel. water content in water cycle module; changed the way the climate modifier (re) for snag/soil decay is calculated.
Added the coarse wood of died trees to the 5-year decay pattern of branches (and renamed therefore to otherWood).		  
/src/core/snag.cpp
/src/core/snag.h
/src/core/watercycle.cpp
/src/core/watercycle.h
/src/tools/globalsettings.cpp
504 4993d 01h werner /src/ New output for "saplings"  
/src/output/saplingout.cpp
/src/output/saplingout.h
/src/core/model.cpp
/src/core/resourceunitspecies.h
/src/core/sapling.cpp
/src/core/sapling.h
/src/core/standstatistics.cpp
/src/core/watercycle.cpp
/src/iland/iland.pro
/src/output/outputmanager.cpp
503 4993d 02h werner /src/ water cycle: fixed a regression with the calculation of average aging.
added "canopyConductance" as variable for resource units.
added a GUI option to change the current log level.		  
/src/core/model.cpp
/src/core/resourceunit.cpp
/src/core/watercycle.cpp
/src/core/watercycle.h
/src/iland/mainwindow.cpp
/src/iland/mainwindow.h
/src/iland/mainwindow.ui
/src/tools/expressionwrapper.cpp

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