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Rev Age Author Path Log message Diff
706 4680d 18h werner /trunk/src/ some performance tests with random number generators. Results so far are not too indicative.  
705 4680d 20h werner /trunk/src/ series of performance tests / modifications.
Using "valgrind" on the linux virtual machine, some performance
measurements were made.
Some candidates for optimization were tested. (1) the applyLIP()
function (about 30% of total run time in runYear()): here several
inlining options were tested; testing the value of the stamp before
using it (in order to omit the other steps) prooved to be slower than
unsing all stamp values.
(2) the random number generator; here the random number generation is
about 5% of the total run time; the commit contains two/three other
variants.
 
697 4688d 21h werner /trunk/ Doxygen documentation revisited.
After re-establishing doxygen documentation (last update: 2009) a lot of smaller/medium documentation fixes.
Documentation is something that could definitely be always improved ;)
 
671 4732d 00h werner /trunk/src/ Necessary changes for GPL licence (i.e. headers in all source files)  
668 4767d 04h werner /trunk/src/ added additional settings for carbon balance of burned trees.
close to version 0.7.0
 
667 4767d 09h werner /trunk/src/ finetuning of fire module (new species parameters, xml file parameters, ...)  
664 4773d 23h werner /trunk/src/ fixes in the fire module  
639 4892d 22h werner / move current content to the "trunk"  
615 4952d 01h werner /src/ removed windows specific _isnan() calls  
608 4958d 07h werner /src/ adding carbon cycle output (and some necessary book keeping code)  
595 4976d 06h werner /src/core/ changed behavior of coarse roots: if biomass exceeds value from allometric relation, the excell biomass is pushed to the soil (avoid piling up of coarse root carbon in the soil)
inlined some biomass functions in species.h.
 
588 4990d 04h werner /src/core/ added carbon-bookkeeping in the regeneration layer.  
579 4992d 20h werner /src/core/ plenty of new/modified functions in the javascript interface of the management class. e.g. randomize(), mean(), sum(), new kill() and manage() functions.  
564 5003d 21h werner /src/ Improvements of the Management API and functionality.
new functionality:
* killSaplings() -> use a "MapGrid" and remove small trees specifically
* properties defining biomass remove fractions during management

Now the tree list of the management object is cleaned up after a management, i.e. successive managements without reloading the tree list are possible.
 
521 5053d 02h werner /src/ moved snag dynamics from rus-level to ru-level  
513 5074d 01h werner /src/core/ fixed a nasty bug: if one tree species succeeded to establish on a formerly empty RU, the saplings of other species were killed (well, not directly, but the environment was not recalculated leading to a f_env value of 0).  
505 5082d 20h werner /src/core/ fix crash small stamps for Acma.  
497 5100d 01h werner /src/ tried some possibilities to eliminate "strange" crashes when simulating very for a long time. Ended up with adding additional "pause" between every 50 year or so (see modelcontroller.cpp); this helps at least a little.
also updated the expression-linearization
 
488 5102d 17h werner / new version including several bug fixes and improvements for the regeneration / sapling growth submodule, as well as some performance optimizations.  
486 5102d 22h werner /src/ Expression: extended linearization range to the upper limit (it is a
typical use to linearize e.g. from 0..1 -> 1 should be included)
removed some warnings that came up when compiling in linux
added a setlocale()-function in main(). This was because otherwise the
"atof"-call when parsing Expressions cut off the fraction part (i.e.
converted "0.285" to "0") (used in Linux german locale)
 

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