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Rev Age Author Path Log message Diff
664 4684d 06h werner /trunk/src/ fixes in the fire module  
639 4803d 04h werner / move current content to the "trunk"  
615 4862d 07h werner /src/ removed windows specific _isnan() calls  
608 4868d 13h werner /src/ adding carbon cycle output (and some necessary book keeping code)  
595 4886d 12h werner /src/core/ changed behavior of coarse roots: if biomass exceeds value from allometric relation, the excell biomass is pushed to the soil (avoid piling up of coarse root carbon in the soil)
inlined some biomass functions in species.h.
 
588 4900d 10h werner /src/core/ added carbon-bookkeeping in the regeneration layer.  
579 4903d 02h werner /src/core/ plenty of new/modified functions in the javascript interface of the management class. e.g. randomize(), mean(), sum(), new kill() and manage() functions.  
564 4914d 03h werner /src/ Improvements of the Management API and functionality.
new functionality:
* killSaplings() -> use a "MapGrid" and remove small trees specifically
* properties defining biomass remove fractions during management

Now the tree list of the management object is cleaned up after a management, i.e. successive managements without reloading the tree list are possible.
 
521 4963d 08h werner /src/ moved snag dynamics from rus-level to ru-level  
513 4984d 07h werner /src/core/ fixed a nasty bug: if one tree species succeeded to establish on a formerly empty RU, the saplings of other species were killed (well, not directly, but the environment was not recalculated leading to a f_env value of 0).  
505 4993d 02h werner /src/core/ fix crash small stamps for Acma.  
497 5010d 07h werner /src/ tried some possibilities to eliminate "strange" crashes when simulating very for a long time. Ended up with adding additional "pause" between every 50 year or so (see modelcontroller.cpp); this helps at least a little.
also updated the expression-linearization
 
488 5012d 23h werner / new version including several bug fixes and improvements for the regeneration / sapling growth submodule, as well as some performance optimizations.  
486 5013d 04h werner /src/ Expression: extended linearization range to the upper limit (it is a
typical use to linearize e.g. from 0..1 -> 1 should be included)
removed some warnings that came up when compiling in linux
added a setlocale()-function in main(). This was because otherwise the
"atof"-call when parsing Expressions cut off the fraction part (i.e.
converted "0.285" to "0") (used in Linux german locale)
 
482 5013d 10h werner /src/core/ fixed bug that recruited trees modified the average aging calculation; added some diagnostic code here and there.  
476 5014d 08h werner /src/ added snag debug output to the gui
corrected calculation of branch biomass in Tree
 
470 5018d 13h werner /src/core/ add light response function to sapling growth (rest: constness of lightresponse function calls)  
468 5019d 07h werner /src/ starting the implementation of the snag dynamics submodule.
New class: Snag
added Snag to ResourceUnitSpecies
added links to Snag in Tree
 
465 5019d 13h werner /src/core/ fixed bug in TACA model calculating fEnvYr.  
463 5020d 00h werner /src/core/ To handle errors in diameter estimation for small trees, an iterative algorithm is used if the "final residual" (between NPP based stem biomass increment and realized stem increment) is > 1kg.  

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