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546 4919d 23h werner /src/core/ modified calculation of 're' (decay rate for snags), and added new model setting ('topLayerWaterContent') for that purpose. New variable 'waterDeficit' per day in WaterCycle.  
541 4944d 19h werner /src/ included new setting "model.settings.decayReferencePsi"  
540 4944d 20h werner /src/ removed the storage of rel. water content in water cycle module; changed the way the climate modifier (re) for snag/soil decay is calculated.
Added the coarse wood of died trees to the 5-year decay pattern of branches (and renamed therefore to otherWood).		  
534 4953d 19h werner /src/ large(r) update of the soil model. Now, the 'kyl' and 'kyr' parameters (i.e. decomposition rates for the litter/wood-soil pool) are now species parameters and calculated dynamically from the litter inputs.  
532 4957d 10h werner /src/ force calculation of 're' in Snag even if no snags are present (Soil needs that value later)  
528 4957d 12h werner /src/ more enabling of C/N cycling in iLand. little GUI-feature: click on a RU in resource-unit visualization now properly shows RU-related debug outputs.  
526 4957d 16h werner /src/ embedding the soil model into iLand. renamed the snag decay debug output.  
525 4957d 17h werner /src/ implemented ICBM/2N soil model (class Soil) and some testing code. So far, the results look promising.  
524 4957d 22h werner /src/ some polishing of the snag dynamics and extending the debug output for that.  
523 4958d 12h werner /src/ some updates to the snag-book-keeping and debug outputs  
522 4958d 15h werner /src/core/ updating the snag-concept (to version 5 from RS)  
490 5006d 23h werner /src/core/ added calculation of the climate indicator "re" used for snag dynamics (decay rate).  
477 5009d 20h werner /src/ testing and refining snag dynamics (esp. debug outputs)  
476 5009d 20h werner /src/ added snag debug output to the gui
corrected calculation of branch biomass in Tree		  
475 5009d 21h werner /src/ * Snag dynamics
debug output "SnagDynamics"
life cycle of Snag objects
include Snag Dynamics in newYear / year end routines

* threadrunner.cpp: parallel execution of species related tasks, e.g. the seed dispersal. In the current form, the ThreadRunner is much nicer:
ThreadRunner runner(mActiveSpecies);
runner.run(func_ptr);		  
468 5014d 19h werner /src/ starting the implementation of the snag dynamics submodule.
New class: Snag
added Snag to ResourceUnitSpecies
added links to Snag in Tree