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720 4623d 14h werner /trunk/src/ fixed a problem when trees died in disturbance and the (unupdated) statistics were used (e.g. the LAI for calculating the water cycle). Now for affected resource units, not only the treelists but also the RU-statistics are updated.
implemented a "radiating" mechanism of border cells. If stand-grid-cells (i.e. 10m height grid resolution) are marked as "outside and forest", then the cells "radiate" some influence on the LIF into the project area. Thus, trees on the edge of the project do *not* have properties of trees standing on a stand edge. Currently, the form/amount of this edge-effect is hard coded.
 
707 4675d 21h werner /trunk/src/ rework of the random numbers in iland.
Now, many (200000) random numbers are precalculated using a given algorithm (there are three or four choices), then the drandom() etc functions read from this array. After some rotations, the numbers are renewed. The point is: this is now reentrant, so the per-thread storage of MTRand objects is obsolete.
 
705 4676d 17h werner /trunk/src/ series of performance tests / modifications.
Using "valgrind" on the linux virtual machine, some performance
measurements were made.
Some candidates for optimization were tested. (1) the applyLIP()
function (about 30% of total run time in runYear()): here several
inlining options were tested; testing the value of the stamp before
using it (in order to omit the other steps) prooved to be slower than
unsing all stamp values.
(2) the random number generator; here the random number generation is
about 5% of the total run time; the commit contains two/three other
variants.
 
671 4727d 21h werner /trunk/src/ Necessary changes for GPL licence (i.e. headers in all source files)  
664 4769d 20h werner /trunk/src/ fixes in the fire module  
662 4770d 21h werner /trunk/src/ continued to work on the fire module. Include the fire severity (i.e. mortality due to fire). This had various other impacts, e.g., on the carbon cycle of saplings.  
639 4888d 18h werner / move current content to the "trunk"  
600 4958d 14h werner /src/ corrected grid export (flipping of y-axis)
added initialization of saplings; StandLoader contains now a routine similar to the one for larger trees to distribute saplings; additionally, a script function (Globals.addSaplingsOnStand()) can be used to use this functionality.
 
575 4988d 23h werner /src/ * renamed toString() from IException to message() (several occurences).
* added a "name" property to the MapGridWrapper
 
574 4989d 01h werner /src/ * modified outputs to write only rows for valid resource units
* dropped setting "woodDecompRate" (snag.cpp)
* calculate the "stockableArea" of a resource unit based on the stand grid
* use the stockableArea for calculation of LAI
 
569 4994d 02h werner /src/ added a "id" for resource units (which comes from initialization grids).
fixed a bug that ru-grids only worked well on second creation of the model.
 
526 5047d 18h werner /src/ embedding the soil model into iLand. renamed the snag decay debug output.  
521 5048d 22h werner /src/ moved snag dynamics from rus-level to ru-level  
487 5098d 15h werner /src/core/ some performance optimizations done on Linux with valgrind /
KCacheGrind.
stamp: did inlining of "distanceToCenter" (is still relatively expensive
due to heavy usage in e.g. applyLip)
Saplings: removed the very exensive way to check if a sapling of a
species is already on a given pixel; we now use a std::bitmap for that
purpose.
grid: optimized the "indexOf(float*)"-method; this method is used very
often.
 
482 5099d 00h werner /src/core/ fixed bug that recruited trees modified the average aging calculation; added some diagnostic code here and there.  
461 5105d 18h werner /src/core/ fixed a bug in bookkeeping values from saplings per ru (average height/average age). little refactoring and improvement of code that deals with "SaplingMaps".  
455 5155d 00h werner /src/ changed the layout of the resourceUnitSpecies from a QVector to a QList<ResourceUnitSpecies*>. This seems to be much more appropriate. But caused many small changes throughout the project.  
454 5155d 00h werner /src/ improvements of regeneration/establishment. Looking for bug that stems obviously from copy-constructor problems (resourceUnitSpecies).  
452 5155d 19h werner /src/ searching for a bug in the sapling growth....  
451 5155d 22h werner /src/ further development of sapling growth  

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