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Rev Age Author Path Log message Diff
1218 2876d 05h werner / clean up repository - make 1.0 trunk again!  
1217 2876d 05h werner / clean up repository - make 1.0 trunk again!  
1213 2882d 01h werner /branches/iland_regen/src/ implementing the stand-wise snapshot feature (for the advanced dynamic initalization)  
1211 2882d 08h werner /branches/iland_regen/src/ added GPL headers for files that did not contain the header  
1208 2884d 03h werner /branches/iland_regen/src/ working on the Spin-up feature (some additions to ABE)  
1203 2906d 06h werner /branches/iland_regen/src/ added the missing "ActPlanting" functions for the "new" regeneration module.  
1196 2997d 01h werner /branches/iland_regen/src/ StandGPP debug output (instead of the missing StandNPP) output  
1182 3022d 02h werner /branches/iland_regen/src/ Torus also effective for seed distribution
new output "SaplingDetails" (super high detail level of individual cohorts)
version information also in ilandc [move version.cpp to core]

[due to a sync problem with the SVN server, some revisions where lost: here they are:]
compiling ilandc

some code clean up - removed old code (sapling.cpp) for sapling trees and establishment.
 
1181 3039d 03h werner /branches/iland_regen/src/ include LDD packages even for N<1 (choose probabilistically)

visualizing seed input from javascript
 
1180 3044d 01h werner /branches/iland_regen/src/ major rewrite of the seed distribution module:
* dispersal kernels fixed (using seeds per area, and not per radius)
* seed production now depends on leaf area of species (on source pixels)
* distribution for all source pixels (skipped the shortcut via continuously covered forest)
* probability of establishment calculated as function of available seedlings (sum of all incoming seedlings)
still testing ;)
more automation functions (e.g. to call OS commands, additional JS event handlers)
 
1179 3046d 03h werner /branches/iland_regen/src/ GUI: visualizing seed maps
minor change in seed kernel calculation
 
1174 3064d 02h werner /branches/iland_regen/src/ fixed a bug in the establishment / saplinggrowth debug outputs (bookkeeping)  
1172 3077d 10h werner /branches/iland_regen/src/ fixed nasty bug in fire module that caused crashes in release mode (but interestingly not in debug mode).
Reason: The ILAND_GUI #define is *not* visible when building the modules (fire, wind, barkbeetle); a conditional define in species.h has the effect that the structure (i.e. the memory address of some of the member properties) are different (specifically, the "mSeedDispersal" property). From the fire module, accessing the property resolved to a wrong memory address -> crash. Fix: moved the color-property (that is affected by the ILAND_GUI #define) to the end of the object....
 
1168 3085d 02h werner /branches/iland_regen/src/ working on serotony, establishment etc. updated new establishment module w.r.t. debug outputs.  
1164 3092d 03h werner /branches/iland_regen/src/ found unexpected behavior of irandom(): obviously, it return *never* the upper bound.
eg. irandom(0,3) -> values 0,1, or 2, but never 3.
changed calls to irandom() accordingly.
added also a better random selection of species in the establishment routine
 
1163 3092d 08h werner /branches/iland_regen/src/ removed the "sapling.h" everywhere.
open:
* establishment: use better random order of species (e.g. by providing N random lists in speciesSet)
 
1162 3092d 09h werner /branches/iland_regen/src/ removed the old "mSaplings" from resource unit/model.
Open Issues:
* ActPlanting [init/remove of saplings]
* MapGrid: retrieve list of saplings
* testing of standloader
 
1158 3094d 04h werner /branches/iland_regen/src/ further performance improvements in regeneration/sapling module.
In total (sim 80 yrs WBT 2km2, from bare ground), iLand is +- 35% faster:
* seed dispersal (not today)
* optimized use of LRI-correction
* better linearization in sapling growth (height growth potential)
 
1157 3094d 11h werner /branches/iland_regen/ merge of changes in the trunk (up to the version used for the 2016 DICE simulation batch).  
1111 3156d 02h werner /branches/iland_regen/src/ first draft of the new "establishment"
added the "Saplings", the new container for establishment/sapling growth
some basic functionality is already there...
 
1104 3164d 09h werner /branches/iland_regen/ Branch dedicated to playing around with establishment/regeneration.
Goals are:
(i) speed up
(ii) introduction of new features for Yellowstone
 
1102 3164d 22h werner /branches/port_qt5_64bit/src/ fixed couple of clang warnings.

some debugging/profiling work w.r.t. establishment/regen.
 
1099 3185d 06h werner /branches/port_qt5_64bit/src/ cleaning gcc warnings, trying to compile on VSC.  
1093 3210d 02h werner /branches/port_qt5_64bit/src/ toying around with yuidoc, some clang-related cleaning.  
1091 3214d 02h werner /branches/port_qt5_64bit/src/tools/ additional JS functions for retrieving grids from iLand. fancy....  
1090 3226d 01h werner /branches/port_qt5_64bit/src/ abe udpates (scheduler problem when stand age is 0)  
1088 3233d 03h werner /branches/port_qt5_64bit/src/ salavage management bark beetle damages
some fixes w.r.t. the correct extent of grids.
added "year" as stand varaible (abe).
 
1085 3239d 02h werner /branches/port_qt5_64bit/src/ working on barkbeetle module (fixing problems, some small modifications, ...)
improving the JS-based spatial analysis toolkit.
 
1084 3241d 01h werner /branches/port_qt5_64bit/src/tools/ removed API change  
1083 3241d 04h werner /branches/port_qt5_64bit/src/ improve API for spatial analysis - now patch creation works also with js.  
1082 3242d 01h werner /branches/port_qt5_64bit/src/ remove out-of-project area from GrassCover
fixed error in calculating the number of bark beetle generations (and changed the handling of sister broods)
 
1081 3246d 02h werner /branches/port_qt5_64bit/src/ created a new javascript wrapper for the iLand "grid" class. This includes some processing (e.g. calculate using expressions), and some function to retrieve grids from iLand (e.g. damage data from disturbance modules, height grid).
fancy!
 
1080 3247d 06h werner /branches/port_qt5_64bit/src/ spatial analysis: add patch analysis (clump sizes), add to wind module (scriptable)  
1077 3255d 07h werner /branches/port_qt5_64bit/src/ implemented stormInfestationProbability in bark beetle module.
added path() function in Globals JS object.
 
1071 3269d 04h werner /branches/port_qt5_64bit/src/ alternative mortality formulation
COST PROFOUND exercise (H. Bugmann)
 
1070 3274d 03h werner /branches/port_qt5_64bit/src/ bark-beetle wind interaction, now working ...  
1065 3275d 22h werner /branches/port_qt5_64bit/src/ interaction of bark beetle and wind disturbances.  
1064 3277d 03h werner /branches/port_qt5_64bit/src/ many changes. Most notably:
* improvements in the grass-cover sub Modules
* interaction between wind and bark beetle
* javascript function to extract seed-distribution-maps
* fixed a bug when continuous seed input was assumed
 
1061 3284d 02h werner /branches/port_qt5_64bit/src/ developinig ABE.
groundwork: creating STP options (i.e. pure JS-options of STPs that can be used in activities)
working on species specific targets for thinnings (involves a lot of thinking and fiddling with javascript)
added an option to include "shortcuts" to often-used functions (i.e. links in the GUI that directly call JS-functions).
 
1059 3289d 03h werner /branches/port_qt5_64bit/src/ added topheight in ABE
additional things like standIds(), ...