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1218 2789d 09h werner / clean up repository - make 1.0 trunk again!  
1217 2789d 09h werner / clean up repository - make 1.0 trunk again!  
1157 3007d 16h werner /branches/iland_regen/ merge of changes in the trunk (up to the version used for the 2016 DICE simulation batch).  
1114 3068d 07h werner /branches/iland_regen/src/ new output for tree removals ("landscape_removed").  
1104 3077d 13h werner /branches/iland_regen/ Branch dedicated to playing around with establishment/regeneration.
Goals are:
(i) speed up
(ii) introduction of new features for Yellowstone
 
1102 3078d 02h werner /branches/port_qt5_64bit/src/ fixed couple of clang warnings.

some debugging/profiling work w.r.t. establishment/regen.
 
1072 3182d 01h werner /branches/port_qt5_64bit/src/core/ mortality exercise for PROFOUND COST action.  
1071 3182d 08h werner /branches/port_qt5_64bit/src/ alternative mortality formulation
COST PROFOUND exercise (H. Bugmann)
 
1064 3190d 07h werner /branches/port_qt5_64bit/src/ many changes. Most notably:
* improvements in the grass-cover sub Modules
* interaction between wind and bark beetle
* javascript function to extract seed-distribution-maps
* fixed a bug when continuous seed input was assumed
 
1050 3229d 14h werner /branches/port_qt5_64bit/src/ interaction wind/bark beetle --- in development  
1044 3252d 09h werner /branches/port_qt5_64bit/src/ implementing the interaction between bark beetle and wind disturbances;
introduced new flags to mark the reason why trees died when they do die, and a mechanism that allows disturbance modules to being notified when trees die. This involved the creation of a new "DisturbanceInterface".
 
1010 3417d 08h werner /branches/port_qt5_64bit/src/ bark beetle module...  
975 3455d 12h werner /branches/port_qt5_64bit/src/ Fixed a snapshot issue.
Now the water-content and the snow-pack are also stored in the snapshot.
statistics are forced to be re-created.
 
951 3555d 03h werner /branches/port_qt5_64bit/src/ many ABE related changes; inter alia:
* syntax checking theme (to detect mis-spelled properties in JS)
* fixed bug in thinning routine (custom-thinning)
* scripting-based approach for initializing regeneration
* thinning routine for selective thinning
...
 
904 3713d 04h werner /branches/port_qt5_64bit/src/ ... working on amie...  
903 3716d 07h werner /branches/port_qt5_64bit/src/ working on AMIE - calculation of mean annual increment.  
885 3755d 06h werner /branches/port_qt5_64bit/src/ .... continuing.... ABE  
779 4061d 09h werner /branches/port_qt5_64bit/  
733 4476d 08h werner /trunk/src/ trying to find the iland bug??  
713 4554d 14h werner /trunk/src/ implemented a way to split the biomass of a dead tree into several pathways (i.e. to soil, to snags, to atmosphere/removal).  
675 4643d 13h werner /trunk/src/ Snapshot functions to save/load a vegetation snapshot (currently: trees, soil, snags). Some additional javascript functions to access the functionality.  
671 4644d 09h werner /trunk/src/ Necessary changes for GPL licence (i.e. headers in all source files)  
668 4679d 13h werner /trunk/src/ added additional settings for carbon balance of burned trees.
close to version 0.7.0
 
667 4679d 18h werner /trunk/src/ finetuning of fire module (new species parameters, xml file parameters, ...)  
639 4805d 07h werner / move current content to the "trunk"  
564 4916d 06h werner /src/ Improvements of the Management API and functionality.
new functionality:
* killSaplings() -> use a "MapGrid" and remove small trees specifically
* properties defining biomass remove fractions during management

Now the tree list of the management object is cleaned up after a management, i.e. successive managements without reloading the tree list are possible.
 
544 4949d 12h werner /src/ MapGrid rocks! It is quite easy now to write - for instance - a management based on polygon defined by a grid; (see the "test" for this case).  
476 5016d 11h werner /src/ added snag debug output to the gui
corrected calculation of branch biomass in Tree
 
449 5072d 14h werner /src/ start of implementation of sapling growth.
setup of the temporal height-map for saplings.
 
407 5155d 13h werner /src/ modified the painting of trees (use now the crown radius)
tried to fix the database lock error when reloading the model (not solved: but: no problem when model was executed for at least one year...)
 
388 5182d 04h werner /src/core/ remodified the age calculation. Now the age is estimated based on the current height relative to h_max. The aging-calculation itself is no longer changed by that.  
385 5182d 13h werner /src/core/ little update to tree age issues  
381 5182d 15h werner /src/core/ appropriate handling of tree age during initialization.
if no age is provided in the input file only the tree height is used for the aging calculation. The tree "age" in that case reflects only the number of years since initialization.
 
287 5371d 22h werner /src/ Tree initialization (random variant). works almost...  
278 5374d 19h werner /src/ Management output. Added a statisticsMgmt() for ResourceUnitSpecies. Complicated to get the order right.  
277 5375d 01h werner /src/ added "Gesamtwuchsleistung" i.e. total growth.  
276 5377d 04h werner /src/ added explicit fine root compartment in tree. Changed partitioning, the calculation of the stress index, follow-up change in several outputs.  
264 5379d 03h werner /src/ TreeOut output (including filtering)  
262 5379d 04h werner /src/ added output for dead trees (StandDeadOut)  
261 5379d 05h werner /src/ * added NPP aboveground to stats
* some update in comments