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Rev Age Author Path Log message Diff
1217 2787d 16h werner / clean up repository - make 1.0 trunk again!  
1203 2817d 17h werner /branches/iland_regen/src/ added the missing "ActPlanting" functions for the "new" regeneration module.  
1190 2925d 11h werner /branches/iland_regen/src/ api documentation....  
1182 2933d 13h werner /branches/iland_regen/src/ Torus also effective for seed distribution
new output "SaplingDetails" (super high detail level of individual cohorts)
version information also in ilandc [move version.cpp to core]

[due to a sync problem with the SVN server, some revisions where lost: here they are:]
compiling ilandc

some code clean up - removed old code (sapling.cpp) for sapling trees and establishment.
 
1164 3003d 14h werner /branches/iland_regen/src/ found unexpected behavior of irandom(): obviously, it return *never* the upper bound.
eg. irandom(0,3) -> values 0,1, or 2, but never 3.
changed calls to irandom() accordingly.
added also a better random selection of species in the establishment routine
 
1162 3003d 20h werner /branches/iland_regen/src/ removed the old "mSaplings" from resource unit/model.
Open Issues:
* ActPlanting [init/remove of saplings]
* MapGrid: retrieve list of saplings
* testing of standloader
 
1159 3005d 09h werner /branches/iland_regen/src/ Changed memory layout of regeneration module.
problems now with invalid (NaN) soil values. Needs further analysis ;)
 
1157 3005d 22h werner /branches/iland_regen/ merge of changes in the trunk (up to the version used for the 2016 DICE simulation batch).  
1104 3075d 20h werner /branches/iland_regen/ Branch dedicated to playing around with establishment/regeneration.
Goals are:
(i) speed up
(ii) introduction of new features for Yellowstone
 
1102 3076d 09h werner /branches/port_qt5_64bit/src/ fixed couple of clang warnings.

some debugging/profiling work w.r.t. establishment/regen.
 
1070 3185d 13h werner /branches/port_qt5_64bit/src/ bark-beetle wind interaction, now working ...  
1062 3193d 13h werner /branches/port_qt5_64bit/src/ small fixes for ABE,

implementation of v1 of the "grass"-model (herbs and grasses on the ground).
 
1058 3201d 15h werner /branches/port_qt5_64bit/src/ Changes in ABE:
new grid (stand treatment program), and now STP is shown when clicking on a standGrid
additional warnings when STPs are not properly defined

other changes:
more recent files, recent files are saved before creating the model
fixed splash screenshot
fixed potential bug in setting up saplings
new JS-function Globals.reloadABE() --> force the reload of the agent based forest engine module
 
1057 3205d 22h werner /branches/port_qt5_64bit/src/ added outbreak duration in bark beetle module  
1042 3256d 17h werner /branches/port_qt5_64bit/src/ working on bark beetle module (antagonists)  
971 3464d 14h werner /branches/port_qt5_64bit/src/core/ introduce possibility to initialize cells with pure species, e.g. pixels (10x10m) that have *only* one species. This uses in a hacky way the "density" parameter of the init files.  
968 3488d 12h werner /branches/port_qt5_64bit/src/core/ allow floating point numbers for stem numbers in initialization.  
967 3492d 14h werner /branches/port_qt5_64bit/src/core/ loading of saplings: this works now when running in standgrid mode.  
966 3493d 12h werner /branches/port_qt5_64bit/src/core/ implementing sapling initialization.  
951 3553d 09h werner /branches/port_qt5_64bit/src/ many ABE related changes; inter alia:
* syntax checking theme (to detect mis-spelled properties in JS)
* fixed bug in thinning routine (custom-thinning)
* scripting-based approach for initializing regeneration
* thinning routine for selective thinning
...
 
948 3564d 11h werner /branches/port_qt5_64bit/src/ little fixes of things found during tests of ABE.  
911 3702d 23h werner /branches/port_qt5_64bit/src/ scheduling, update in planting  
904 3711d 10h werner /branches/port_qt5_64bit/src/ ... working on amie...  
901 3721d 00h werner /branches/port_qt5_64bit/src/ repeating activities,
canceling of execution of javascript code in ABE (abort())
some other stuff....
 
782 4045d 20h werner /branches/port_qt5_64bit/src/ modifications in the wind module (incorporating changes after first submission of the paper and friendly review by barry gardiner). changes are mainly related to the vertical wind profile.  
779 4059d 15h werner /branches/port_qt5_64bit/  
777 4129d 16h werner /trunk/src/ removed a couple of warnings (partly using Q_UNUSED but also dropping of parameters)  
775 4130d 14h werner /trunk/src/core/ fixed (wrong) error message  
774 4131d 16h werner /trunk/src/ some additional error messages (expressions, stand loading)  
753 4298d 15h werner /trunk/src/ minor changes after using CPPCheck source code scan utilty.  
744 4460d 11h werner /trunk/src/ minor layout-improvement for the about-dialog
started to toy around with the graphics-stack
 
743 4460d 22h werner /trunk/ new version 0.8.2
includes topo modifier for wind module on 10m grid.
 
739 4468d 17h werner /trunk/src/core/ removed some warnings, added a ASSERT to stamp-selection (problem with
old stamps)
 
736 4472d 17h werner /trunk/src/core/ fixed the crashes (I hope).
The problem was either:
(a) if you load just one year of climate and have a leapyear, then the store for climate-days can is too short (it was: years*366, now: years*366 + 1
(b) The value of "mHeightGridTries" (in standloader) was not initialized with disabled "heightGrid".
 
734 4472d 20h werner /trunk/src/ small "fixes" (or tries to fix) as iLand is still crashing...  
733 4474d 14h werner /trunk/src/ trying to find the iland bug??  
732 4505d 16h werner /trunk/src/ initialization of trees with given tree heights. The tree height data (e.g. Lidar data) is loaded from a GIS grid file.
some additional changes with painting different grids.
added also an option to use mapgrids without the 'spatial index' (e.g. for float grids on height grid resolution).
 
707 4590d 17h werner /trunk/src/ rework of the random numbers in iland.
Now, many (200000) random numbers are precalculated using a given algorithm (there are three or four choices), then the drandom() etc functions read from this array. After some rotations, the numbers are renewed. The point is: this is now reentrant, so the per-thread storage of MTRand objects is obsolete.
 
705 4591d 12h werner /trunk/src/ series of performance tests / modifications.
Using "valgrind" on the linux virtual machine, some performance
measurements were made.
Some candidates for optimization were tested. (1) the applyLIP()
function (about 30% of total run time in runYear()): here several
inlining options were tested; testing the value of the stamp before
using it (in order to omit the other steps) prooved to be slower than
unsing all stamp values.
(2) the random number generator; here the random number generation is
about 5% of the total run time; the commit contains two/three other
variants.
 
699 4598d 15h werner /trunk/ standloader now can also initialize from vegetation snapshot databases;
fire-module: fire extinction probability works only after reaching the minimum fire size parameter.