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Rev Age Author Path Log message Diff
1190 3018d 10h werner /branches/iland_regen/src/ api documentation....  
1182 3026d 11h werner /branches/iland_regen/src/ Torus also effective for seed distribution
new output "SaplingDetails" (super high detail level of individual cohorts)
version information also in ilandc [move version.cpp to core]

[due to a sync problem with the SVN server, some revisions where lost: here they are:]
compiling ilandc

some code clean up - removed old code (sapling.cpp) for sapling trees and establishment.
 
1164 3096d 12h werner /branches/iland_regen/src/ found unexpected behavior of irandom(): obviously, it return *never* the upper bound.
eg. irandom(0,3) -> values 0,1, or 2, but never 3.
changed calls to irandom() accordingly.
added also a better random selection of species in the establishment routine
 
1162 3096d 18h werner /branches/iland_regen/src/ removed the old "mSaplings" from resource unit/model.
Open Issues:
* ActPlanting [init/remove of saplings]
* MapGrid: retrieve list of saplings
* testing of standloader
 
1159 3098d 08h werner /branches/iland_regen/src/ Changed memory layout of regeneration module.
problems now with invalid (NaN) soil values. Needs further analysis ;)
 
1157 3098d 20h werner /branches/iland_regen/ merge of changes in the trunk (up to the version used for the 2016 DICE simulation batch).  
1104 3168d 18h werner /branches/iland_regen/ Branch dedicated to playing around with establishment/regeneration.
Goals are:
(i) speed up
(ii) introduction of new features for Yellowstone
 
1102 3169d 07h werner /branches/port_qt5_64bit/src/ fixed couple of clang warnings.

some debugging/profiling work w.r.t. establishment/regen.
 
1070 3278d 12h werner /branches/port_qt5_64bit/src/ bark-beetle wind interaction, now working ...  
1062 3286d 11h werner /branches/port_qt5_64bit/src/ small fixes for ABE,

implementation of v1 of the "grass"-model (herbs and grasses on the ground).
 
1058 3294d 14h werner /branches/port_qt5_64bit/src/ Changes in ABE:
new grid (stand treatment program), and now STP is shown when clicking on a standGrid
additional warnings when STPs are not properly defined

other changes:
more recent files, recent files are saved before creating the model
fixed splash screenshot
fixed potential bug in setting up saplings
new JS-function Globals.reloadABE() --> force the reload of the agent based forest engine module
 
1057 3298d 21h werner /branches/port_qt5_64bit/src/ added outbreak duration in bark beetle module  
1042 3349d 15h werner /branches/port_qt5_64bit/src/ working on bark beetle module (antagonists)  
971 3557d 12h werner /branches/port_qt5_64bit/src/core/ introduce possibility to initialize cells with pure species, e.g. pixels (10x10m) that have *only* one species. This uses in a hacky way the "density" parameter of the init files.  
968 3581d 11h werner /branches/port_qt5_64bit/src/core/ allow floating point numbers for stem numbers in initialization.  
967 3585d 13h werner /branches/port_qt5_64bit/src/core/ loading of saplings: this works now when running in standgrid mode.  
966 3586d 11h werner /branches/port_qt5_64bit/src/core/ implementing sapling initialization.  
951 3646d 08h werner /branches/port_qt5_64bit/src/ many ABE related changes; inter alia:
* syntax checking theme (to detect mis-spelled properties in JS)
* fixed bug in thinning routine (custom-thinning)
* scripting-based approach for initializing regeneration
* thinning routine for selective thinning
...
 
948 3657d 10h werner /branches/port_qt5_64bit/src/ little fixes of things found during tests of ABE.  
911 3795d 22h werner /branches/port_qt5_64bit/src/ scheduling, update in planting  
904 3804d 09h werner /branches/port_qt5_64bit/src/ ... working on amie...  
901 3813d 22h werner /branches/port_qt5_64bit/src/ repeating activities,
canceling of execution of javascript code in ABE (abort())
some other stuff....
 
782 4138d 18h werner /branches/port_qt5_64bit/src/ modifications in the wind module (incorporating changes after first submission of the paper and friendly review by barry gardiner). changes are mainly related to the vertical wind profile.  
779 4152d 13h werner /branches/port_qt5_64bit/  
777 4222d 15h werner /trunk/src/ removed a couple of warnings (partly using Q_UNUSED but also dropping of parameters)  
775 4223d 13h werner /trunk/src/core/ fixed (wrong) error message  
774 4224d 14h werner /trunk/src/ some additional error messages (expressions, stand loading)  
753 4391d 13h werner /trunk/src/ minor changes after using CPPCheck source code scan utilty.  
744 4553d 09h werner /trunk/src/ minor layout-improvement for the about-dialog
started to toy around with the graphics-stack
 
743 4553d 20h werner /trunk/ new version 0.8.2
includes topo modifier for wind module on 10m grid.
 
739 4561d 15h werner /trunk/src/core/ removed some warnings, added a ASSERT to stamp-selection (problem with
old stamps)
 
736 4565d 16h werner /trunk/src/core/ fixed the crashes (I hope).
The problem was either:
(a) if you load just one year of climate and have a leapyear, then the store for climate-days can is too short (it was: years*366, now: years*366 + 1
(b) The value of "mHeightGridTries" (in standloader) was not initialized with disabled "heightGrid".
 
734 4565d 18h werner /trunk/src/ small "fixes" (or tries to fix) as iLand is still crashing...  
733 4567d 13h werner /trunk/src/ trying to find the iland bug??  
732 4598d 15h werner /trunk/src/ initialization of trees with given tree heights. The tree height data (e.g. Lidar data) is loaded from a GIS grid file.
some additional changes with painting different grids.
added also an option to use mapgrids without the 'spatial index' (e.g. for float grids on height grid resolution).
 
707 4683d 15h werner /trunk/src/ rework of the random numbers in iland.
Now, many (200000) random numbers are precalculated using a given algorithm (there are three or four choices), then the drandom() etc functions read from this array. After some rotations, the numbers are renewed. The point is: this is now reentrant, so the per-thread storage of MTRand objects is obsolete.
 
705 4684d 10h werner /trunk/src/ series of performance tests / modifications.
Using "valgrind" on the linux virtual machine, some performance
measurements were made.
Some candidates for optimization were tested. (1) the applyLIP()
function (about 30% of total run time in runYear()): here several
inlining options were tested; testing the value of the stamp before
using it (in order to omit the other steps) prooved to be slower than
unsing all stamp values.
(2) the random number generator; here the random number generation is
about 5% of the total run time; the commit contains two/three other
variants.
 
699 4691d 13h werner /trunk/ standloader now can also initialize from vegetation snapshot databases;
fire-module: fire extinction probability works only after reaching the minimum fire size parameter.
 
697 4692d 11h werner /trunk/ Doxygen documentation revisited.
After re-establishing doxygen documentation (last update: 2009) a lot of smaller/medium documentation fixes.
Documentation is something that could definitely be always improved ;)
 
671 4735d 14h werner /trunk/src/ Necessary changes for GPL licence (i.e. headers in all source files)