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| Rev | Author | Line No. | Line |
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| 1 | |||
| 111 | Werner | 2 | #include "global.h" |
| 189 | iland | 3 | #include "resourceunitspecies.h" |
| 111 | Werner | 4 | |
| 5 | #include "species.h" |
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| 189 | iland | 6 | #include "resourceunit.h" |
| 468 | werner | 7 | #include "model.h" |
| 496 | werner | 8 | #include "watercycle.h" |
| 626 | werner | 9 | #include "helper.h" |
| 376 | werner | 10 | |
| 458 | werner | 11 | /** @class ResourceUnitSpecies |
| 697 | werner | 12 | @ingroup core |
| 458 | werner | 13 | The class contains data available at ResourceUnit x Species scale. |
| 14 | Data stored is either statistical (i.e. number of trees per species) or used |
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| 468 | werner | 15 | within the model (e.g. fraction of utilizable Radiation). |
| 16 | Important submodules are: |
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| 17 | * 3PG production (Production3PG) |
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| 18 | * Establishment |
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| 19 | * Growth and Recruitment of Saplings |
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| 20 | * Snag dynamics |
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| 458 | werner | 21 | */ |
| 468 | werner | 22 | ResourceUnitSpecies::~ResourceUnitSpecies() |
| 23 | { |
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| 24 | } |
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| 440 | werner | 25 | |
| 376 | werner | 26 | double ResourceUnitSpecies::leafArea() const |
| 27 | { |
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| 28 | // Leaf area of the species: |
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| 29 | // total leaf area on the RU * fraction of leafarea |
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| 30 | return mLAIfactor * ru()->leafAreaIndex(); |
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| 31 | } |
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| 32 | |||
| 235 | werner | 33 | void ResourceUnitSpecies::setup(Species *species, ResourceUnit *ru) |
| 34 | { |
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| 35 | mSpecies = species; |
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| 36 | mRU = ru; |
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| 37 | mResponse.setup(this); |
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| 38 | m3PG.setResponse(&mResponse); |
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| 440 | werner | 39 | mEstablishment.setup(ru->climate(), this); |
| 452 | werner | 40 | mSapling.setup(this); |
| 235 | werner | 41 | mStatistics.setResourceUnitSpecies(this); |
| 277 | werner | 42 | mStatisticsDead.setResourceUnitSpecies(this); |
| 278 | werner | 43 | mStatisticsMgmt.setResourceUnitSpecies(this); |
| 440 | werner | 44 | |
| 277 | werner | 45 | mRemovedGrowth = 0.; |
| 438 | werner | 46 | mLastYear = -1; |
| 468 | werner | 47 | |
| 235 | werner | 48 | } |
| 111 | Werner | 49 | |
| 50 | |||
| 440 | werner | 51 | void ResourceUnitSpecies::calculate(const bool fromEstablishment) |
| 226 | werner | 52 | { |
| 438 | werner | 53 | if (mLastYear == GlobalSettings::instance()->currentYear()) |
| 54 | return; |
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| 55 | |||
| 518 | werner | 56 | // the call *not* from establishment |
| 57 | if (!fromEstablishment) |
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| 58 | statistics().clear(); |
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| 513 | werner | 59 | |
| 440 | werner | 60 | if (mLAIfactor>0 || fromEstablishment==true) { |
| 496 | werner | 61 | // execute the water calculation... |
| 62 | if (fromEstablishment) |
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| 63 | const_cast<WaterCycle*>(mRU->waterCycle())->run(); // run the water sub model (only if this has not be done already) |
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| 626 | werner | 64 | DebugTimer rst("response+3pg"); |
| 496 | werner | 65 | mResponse.calculate();// calculate environmental responses per species (vpd, temperature, ...) |
| 66 | m3PG.calculate();// production of NPP |
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| 513 | werner | 67 | mLastYear = GlobalSettings::instance()->currentYear(); // mark this year as processed |
| 369 | werner | 68 | } else { |
| 69 | // if no LAI is present, then just clear the respones. |
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| 70 | mResponse.clear(); |
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| 71 | m3PG.clear(); |
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| 72 | } |
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| 226 | werner | 73 | } |
| 277 | werner | 74 | |
| 75 | |||
| 76 | void ResourceUnitSpecies::updateGWL() |
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| 77 | { |
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| 78 | // removed growth is the running sum of all removed |
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| 79 | // tree volume. the current "GWL" therefore is current volume (standing) + mRemovedGrowth. |
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| 278 | werner | 80 | mRemovedGrowth+=statisticsDead().volume() + statisticsMgmt().volume(); |
| 277 | werner | 81 | } |
| 440 | werner | 82 | |
| 83 | void ResourceUnitSpecies::calclulateEstablishment() |
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| 84 | { |
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| 85 | mEstablishment.calculate(); |
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| 442 | werner | 86 | //DBGMODE( |
| 87 | if (GlobalSettings::instance()->isDebugEnabled(GlobalSettings::dEstablishment)) { |
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| 88 | DebugList &out = GlobalSettings::instance()->debugList(ru()->index(), GlobalSettings::dEstablishment); |
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| 89 | // establishment details |
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| 605 | werner | 90 | out << mSpecies->id() << ru()->index() << ru()->id(); |
| 442 | werner | 91 | out << mEstablishment.avgSeedDensity(); |
| 92 | out << mEstablishment.TACAminTemp() << mEstablishment.TACAchill() << mEstablishment.TACAfrostFree() << mEstablishment.TACgdd(); |
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| 93 | out << mEstablishment.TACAfrostDaysAfterBudBirst() << mEstablishment.abioticEnvironment(); |
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| 94 | out << m3PG.fEnvYear() << mEstablishment.avgLIFValue() << mEstablishment.numberEstablished(); |
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| 466 | werner | 95 | out << mSapling.livingSaplings() << mSapling.averageHeight() << mSapling.averageAge() << mSapling.averageDeltaHPot() << mSapling.averageDeltaHRealized(); |
| 471 | werner | 96 | out << mSapling.newSaplings() << mSapling.diedSaplings() << mSapling.recruitedSaplings() << mSpecies->saplingGrowthParameters().referenceRatio; |
| 442 | werner | 97 | } |
| 98 | //); // DBGMODE() |
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| 440 | werner | 99 | |
| 442 | werner | 100 | |
| 440 | werner | 101 | if ( logLevelDebug() ) |
| 102 | qDebug() << "establishment of RU" << mRU->index() << "species" << species()->id() |
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| 103 | << "seeds density:" << mEstablishment.avgSeedDensity() |
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| 104 | << "abiotic environment:" << mEstablishment.abioticEnvironment() |
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| 105 | << "f_env,yr:" << m3PG.fEnvYear() |
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| 106 | << "N(established):" << mEstablishment.numberEstablished(); |
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| 107 | |||
| 108 | } |
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| 450 | werner | 109 | |
| 110 | void ResourceUnitSpecies::calclulateSaplingGrowth() |
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| 111 | { |
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| 112 | mSapling.calculateGrowth(); |
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| 113 | } |
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| 453 | werner | 114 | |
| 115 | void ResourceUnitSpecies::visualGrid(Grid<float> &grid) const |
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| 116 | { |
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| 564 | werner | 117 | mSapling.fillMaxHeightGrid(grid); |
| 453 | werner | 118 | } |
| 462 | werner | 119 | |
| 475 | werner | 120 |