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| 1 | |||
| 111 | Werner | 2 | #include "global.h" |
| 189 | iland | 3 | #include "resourceunitspecies.h" |
| 111 | Werner | 4 | |
| 5 | #include "species.h" |
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| 189 | iland | 6 | #include "resourceunit.h" |
| 468 | werner | 7 | #include "model.h" |
| 8 | #include "snag.h" |
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| 376 | werner | 9 | |
| 458 | werner | 10 | /** @class ResourceUnitSpecies |
| 11 | The class contains data available at ResourceUnit x Species scale. |
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| 12 | Data stored is either statistical (i.e. number of trees per species) or used |
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| 468 | werner | 13 | within the model (e.g. fraction of utilizable Radiation). |
| 14 | Important submodules are: |
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| 15 | * 3PG production (Production3PG) |
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| 16 | * Establishment |
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| 17 | * Growth and Recruitment of Saplings |
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| 18 | * Snag dynamics |
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| 458 | werner | 19 | */ |
| 468 | werner | 20 | ResourceUnitSpecies::~ResourceUnitSpecies() |
| 21 | { |
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| 22 | if (mSnag) |
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| 23 | delete mSnag; |
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| 24 | mSnag = 0; |
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| 25 | } |
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| 440 | werner | 26 | |
| 376 | werner | 27 | double ResourceUnitSpecies::leafArea() const |
| 28 | { |
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| 29 | // Leaf area of the species: |
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| 30 | // total leaf area on the RU * fraction of leafarea |
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| 31 | return mLAIfactor * ru()->leafAreaIndex(); |
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| 32 | } |
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| 33 | |||
| 235 | werner | 34 | void ResourceUnitSpecies::setup(Species *species, ResourceUnit *ru) |
| 35 | { |
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| 36 | mSpecies = species; |
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| 37 | mRU = ru; |
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| 38 | mResponse.setup(this); |
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| 39 | m3PG.setResponse(&mResponse); |
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| 440 | werner | 40 | mEstablishment.setup(ru->climate(), this); |
| 452 | werner | 41 | mSapling.setup(this); |
| 235 | werner | 42 | mStatistics.setResourceUnitSpecies(this); |
| 277 | werner | 43 | mStatisticsDead.setResourceUnitSpecies(this); |
| 278 | werner | 44 | mStatisticsMgmt.setResourceUnitSpecies(this); |
| 468 | werner | 45 | if (mSnag) |
| 46 | delete mSnag; |
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| 47 | mSnag=0; |
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| 48 | if (Model::settings().carbonCycleEnabled) { |
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| 49 | mSnag = new Snag; |
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| 50 | mSnag->setup(); |
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| 51 | } |
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| 440 | werner | 52 | |
| 277 | werner | 53 | mRemovedGrowth = 0.; |
| 438 | werner | 54 | mLastYear = -1; |
| 468 | werner | 55 | |
| 235 | werner | 56 | } |
| 111 | Werner | 57 | |
| 58 | |||
| 440 | werner | 59 | void ResourceUnitSpecies::calculate(const bool fromEstablishment) |
| 226 | werner | 60 | { |
| 438 | werner | 61 | if (mLastYear == GlobalSettings::instance()->currentYear()) |
| 62 | return; |
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| 63 | mLastYear = GlobalSettings::instance()->currentYear(); |
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| 64 | |||
| 65 | statistics().clear(); |
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| 440 | werner | 66 | if (mLAIfactor>0 || fromEstablishment==true) { |
| 369 | werner | 67 | mResponse.calculate();///< calculate environmental responses per species (vpd, temperature, ...) |
| 68 | m3PG.calculate();///< production of NPP |
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| 69 | } else { |
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| 70 | // if no LAI is present, then just clear the respones. |
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| 376 | werner | 71 | // note: subject to change when regeneration is added... |
| 369 | werner | 72 | mResponse.clear(); |
| 73 | m3PG.clear(); |
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| 74 | } |
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| 226 | werner | 75 | } |
| 277 | werner | 76 | |
| 77 | |||
| 78 | void ResourceUnitSpecies::updateGWL() |
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| 79 | { |
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| 80 | // removed growth is the running sum of all removed |
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| 81 | // tree volume. the current "GWL" therefore is current volume (standing) + mRemovedGrowth. |
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| 278 | werner | 82 | mRemovedGrowth+=statisticsDead().volume() + statisticsMgmt().volume(); |
| 277 | werner | 83 | } |
| 440 | werner | 84 | |
| 85 | void ResourceUnitSpecies::calclulateEstablishment() |
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| 86 | { |
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| 87 | mEstablishment.calculate(); |
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| 442 | werner | 88 | //DBGMODE( |
| 89 | if (GlobalSettings::instance()->isDebugEnabled(GlobalSettings::dEstablishment)) { |
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| 90 | DebugList &out = GlobalSettings::instance()->debugList(ru()->index(), GlobalSettings::dEstablishment); |
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| 91 | // establishment details |
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| 92 | out << mSpecies->id() << ru()->index(); |
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| 93 | out << mEstablishment.avgSeedDensity(); |
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| 94 | out << mEstablishment.TACAminTemp() << mEstablishment.TACAchill() << mEstablishment.TACAfrostFree() << mEstablishment.TACgdd(); |
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| 95 | out << mEstablishment.TACAfrostDaysAfterBudBirst() << mEstablishment.abioticEnvironment(); |
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| 96 | out << m3PG.fEnvYear() << mEstablishment.avgLIFValue() << mEstablishment.numberEstablished(); |
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| 466 | werner | 97 | out << mSapling.livingSaplings() << mSapling.averageHeight() << mSapling.averageAge() << mSapling.averageDeltaHPot() << mSapling.averageDeltaHRealized(); |
| 98 | out << mSapling.newSaplings() << mSapling.diedSaplings() << mSapling.recruitedSaplings(); |
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| 442 | werner | 99 | } |
| 100 | //); // DBGMODE() |
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| 440 | werner | 101 | |
| 442 | werner | 102 | |
| 440 | werner | 103 | if ( logLevelDebug() ) |
| 104 | qDebug() << "establishment of RU" << mRU->index() << "species" << species()->id() |
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| 105 | << "seeds density:" << mEstablishment.avgSeedDensity() |
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| 106 | << "abiotic environment:" << mEstablishment.abioticEnvironment() |
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| 107 | << "f_env,yr:" << m3PG.fEnvYear() |
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| 108 | << "N(established):" << mEstablishment.numberEstablished(); |
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| 109 | |||
| 110 | } |
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| 450 | werner | 111 | |
| 112 | void ResourceUnitSpecies::calclulateSaplingGrowth() |
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| 113 | { |
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| 114 | mSapling.calculateGrowth(); |
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| 115 | } |
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| 453 | werner | 116 | |
| 117 | void ResourceUnitSpecies::visualGrid(Grid<float> &grid) const |
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| 118 | { |
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| 119 | mSapling.fillHeightGrid(grid); |
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| 120 | } |
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| 462 | werner | 121 |