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Rev Age Author Path Log message Diff
1222 2744d 12h werner / public SVN  
1221 2744d 12h werner /branches/ public SVN  
1220 2744d 12h werner /branches/version1.0/ Version 1.0  
1218 2744d 14h werner / clean up repository - make 1.0 trunk again!  
1217 2744d 14h werner / clean up repository - make 1.0 trunk again!  
1182 2890d 11h werner /branches/iland_regen/src/ Torus also effective for seed distribution
new output "SaplingDetails" (super high detail level of individual cohorts)
version information also in ilandc [move version.cpp to core]

[due to a sync problem with the SVN server, some revisions where lost: here they are:]
compiling ilandc

some code clean up - removed old code (sapling.cpp) for sapling trees and establishment.
 
1177 2921d 12h werner /branches/iland_regen/src/ updating the sapling growth (calculation of stem numbers)  
1175 2931d 13h werner /branches/iland_regen/src/core/ testing change in the way the number of saplings is estimated (when several species reside on the same pixel)  
1168 2953d 11h werner /branches/iland_regen/src/ working on serotony, establishment etc. updated new establishment module w.r.t. debug outputs.  
1162 2960d 18h werner /branches/iland_regen/src/ removed the old "mSaplings" from resource unit/model.
Open Issues:
* ActPlanting [init/remove of saplings]
* MapGrid: retrieve list of saplings
* testing of standloader
 
1157 2962d 20h werner /branches/iland_regen/ merge of changes in the trunk (up to the version used for the 2016 DICE simulation batch).  
1104 3032d 18h werner /branches/iland_regen/ Branch dedicated to playing around with establishment/regeneration.
Goals are:
(i) speed up
(ii) introduction of new features for Yellowstone
 
1033 3313d 20h werner /branches/port_qt5_64bit/src/ added GPL headers to files where it was still missing (mainly all ABE and BarkBeetle module files).  
1005 3380d 14h werner /branches/port_qt5_64bit/src/core/ further optimization:
I know switch between the old and the new algorithm (based on some measurements and an statistical analysis).
the old algorithm works better, if < 90% of the area are covered....
 
936 3550d 12h werner /branches/port_qt5_64bit/src/ searching for bugs in the bookkeeping of increments, volumes.
very cumbersome....
 
863 3809d 13h werner /branches/port_qt5_64bit/ renaming of the FOME to AMIE.
unfortunately, some partial merge of changes in Qt4-branch.
 
808 3864d 10h werner /branches/port_qt5_64bit/src/ implementing FOME.
* splitting "helper.cpp" into several files (debugtimer.h, statdata.h, viewport.h) (and changing lots of includes)
* implementing setup of activities (extracting from Javascript)
 
779 4016d 13h werner /branches/port_qt5_64bit/  
697 4556d 11h werner /trunk/ Doxygen documentation revisited.
After re-establishing doxygen documentation (last update: 2009) a lot of smaller/medium documentation fixes.
Documentation is something that could definitely be always improved ;)
 
639 4760d 12h werner / move current content to the "trunk"  
626 4812d 08h werner /src/core/ added some debug timers plus completed the executable directory (added the sqlite-plugin)  
605 4829d 17h werner /src/ added the "rid" (i.e. a unique id per resource unit) in various debug outputs.
added the "shell" of a new carbonflow output.
 
564 4871d 11h werner /src/ Improvements of the Management API and functionality.
new functionality:
* killSaplings() -> use a "MapGrid" and remove small trees specifically
* properties defining biomass remove fractions during management

Now the tree list of the management object is cleaned up after a management, i.e. successive managements without reloading the tree list are possible.
 
521 4920d 16h werner /src/ moved snag dynamics from rus-level to ru-level  
518 4939d 10h werner /src/core/ while fixing #513 a bug slipped in that reduced stand outputs.  
513 4941d 15h werner /src/core/ fixed a nasty bug: if one tree species succeeded to establish on a formerly empty RU, the saplings of other species were killed (well, not directly, but the environment was not recalculated leading to a f_env value of 0).  
496 4967d 18h werner /src/core/ changed the behavior of the water-cycle wrt establishment: now the water cycle is executed even if no adult trees are on a resource unit  
490 4968d 19h werner /src/core/ added calculation of the climate indicator "re" used for snag dynamics (decay rate).  
477 4971d 16h werner /src/ testing and refining snag dynamics (esp. debug outputs)  
475 4971d 17h werner /src/ * Snag dynamics
debug output "SnagDynamics"
life cycle of Snag objects
include Snag Dynamics in newYear / year end routines

* threadrunner.cpp: parallel execution of species related tasks, e.g. the seed dispersal. In the current form, the ThreadRunner is much nicer:
ThreadRunner runner(mActiveSpecies);
runner.run(func_ptr);
 
471 4975d 20h werner /src/ added "refRatio" to debug output for establishment.  
468 4976d 15h werner /src/ starting the implementation of the snag dynamics submodule.
New class: Snag
added Snag to ResourceUnitSpecies
added links to Snag in Tree
 
466 4976d 21h werner /src/ added fields to establishment debug output.  
462 4977d 08h werner /src/core/ if a sapling of a species is already present at a specific location (i.e.: pixel), than no other cohort of that species can regenerate on that pixel.
new function: hasSaplingAt().
 
458 4992d 10h werner /src/ some minor documentation things.  
453 5027d 07h werner /src/ sapling growth now in a basic working state. started to implement recruitment. One bug with the "maximum-establishment-height-grid" known.
added also visualization of regeneration layer. Once I have time, I should restructure the drawing/visualization code as it gets quirky (and a paper-concept is available...)
 
452 5027d 13h werner /src/ searching for a bug in the sapling growth....  
451 5027d 16h werner /src/ further development of sapling growth  
450 5027d 18h werner /src/core/ implementing sapling growth...  
442 5079d 12h werner /src/ Debug output for establishment.