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1219 2719d 16h werner /trunk/ commit of iLand executables
Qt 5.6
iLand 1.0		  
1218 2719d 17h werner / clean up repository - make 1.0 trunk again!  
1217 2719d 17h werner / clean up repository - make 1.0 trunk again!  
1214 2719d 17h werner /branches/iland_regen/src/ fixed effect of waterlogging  
1213 2725d 13h werner /branches/iland_regen/src/ implementing the stand-wise snapshot feature (for the advanced dynamic initalization)  
1211 2725d 20h werner /branches/iland_regen/src/ added GPL headers for files that did not contain the header  
1210 2725d 22h werner /branches/iland_regen/ improve error message when Environment is not set up correctly.  
1204 2732d 20h werner /branches/iland_regen/src/ fixed some text strings (debug messages).  
1203 2749d 18h werner /branches/iland_regen/src/ added the missing "ActPlanting" functions for the "new" regeneration module.  
1202 2770d 15h werner /branches/iland_regen/src/ searching/fixing issues with carbon cycle: NEP as provided by carbonflow output (NPP-Rh-Mgmt) is different from NEP as derived by the delta of the carbon stocks.
As usual, very hard to track down these issues, but:
* bark beetle module: foliage loss from BB-trees now correctly routed to soil
* order of modules in model: switched disturbances and carbon cylcle (in order to correctly track all carbon changes due to disturbances)
* fixed a problem with the calculation of NPP: after disturbances stand level NPP was set to 0 (since statistics were recalculated after disturbaces, but NPP values are not available then). Introduced: StandStatistics::clearOnlyTrees()
* flow from branches to the atmosphere (decay of branches) now tracked correctly (changes the NEP calulation).		  
1196 2840d 13h werner /branches/iland_regen/src/ StandGPP debug output (instead of the missing StandNPP) output  
1194 2850d 17h werner /branches/iland_regen/src/ more documentation....  
1193 2852d 22h werner /branches/iland_regen/src/ update version  
1190 2857d 12h werner /branches/iland_regen/src/ api documentation....  
1184 2860d 20h werner /branches/iland_regen/src/ update JS documentation  
1183 2864d 16h werner /branches/iland_regen/src/ added new output with sapling details.
"version" in core folder.		  
1182 2865d 14h werner /branches/iland_regen/src/ Torus also effective for seed distribution
new output "SaplingDetails" (super high detail level of individual cohorts)
version information also in ilandc [move version.cpp to core]

[due to a sync problem with the SVN server, some revisions where lost: here they are:]
compiling ilandc

some code clean up - removed old code (sapling.cpp) for sapling trees and establishment.		  
1181 2882d 15h werner /branches/iland_regen/src/ include LDD packages even for N<1 (choose probabilistically)

visualizing seed input from javascript		  
1180 2887d 13h werner /branches/iland_regen/src/ major rewrite of the seed distribution module:
* dispersal kernels fixed (using seeds per area, and not per radius)
* seed production now depends on leaf area of species (on source pixels)
* distribution for all source pixels (skipped the shortcut via continuously covered forest)
* probability of establishment calculated as function of available seedlings (sum of all incoming seedlings)
still testing ;)
more automation functions (e.g. to call OS commands, additional JS event handlers)		  
1179 2889d 16h werner /branches/iland_regen/src/ GUI: visualizing seed maps
minor change in seed kernel calculation		  

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