| Rev |
Age |
Author |
Path |
Log message |
Diff |
| 1218 |
2742d 07h |
werner |
/ |
clean up repository - make 1.0 trunk again! |
|
| 1217 |
2742d 07h |
werner |
/ |
clean up repository - make 1.0 trunk again! |
|
| 1214 |
2742d 07h |
werner |
/branches/iland_regen/src/ |
fixed effect of waterlogging |
|
| 1213 |
2748d 04h |
werner |
/branches/iland_regen/src/ |
implementing the stand-wise snapshot feature (for the advanced dynamic initalization) |
|
| 1211 |
2748d 11h |
werner |
/branches/iland_regen/src/ |
added GPL headers for files that did not contain the header |
|
| 1210 |
2748d 12h |
werner |
/branches/iland_regen/ |
improve error message when Environment is not set up correctly. |
|
| 1204 |
2755d 11h |
werner |
/branches/iland_regen/src/ |
fixed some text strings (debug messages). |
|
| 1203 |
2772d 08h |
werner |
/branches/iland_regen/src/ |
added the missing "ActPlanting" functions for the "new" regeneration module. |
|
| 1202 |
2793d 05h |
werner |
/branches/iland_regen/src/ |
searching/fixing issues with carbon cycle: NEP as provided by carbonflow output (NPP-Rh-Mgmt) is different from NEP as derived by the delta of the carbon stocks.
As usual, very hard to track down these issues, but:
* bark beetle module: foliage loss from BB-trees now correctly routed to soil
* order of modules in model: switched disturbances and carbon cylcle (in order to correctly track all carbon changes due to disturbances)
* fixed a problem with the calculation of NPP: after disturbances stand level NPP was set to 0 (since statistics were recalculated after disturbaces, but NPP values are not available then). Introduced: StandStatistics::clearOnlyTrees()
* flow from branches to the atmosphere (decay of branches) now tracked correctly (changes the NEP calulation). |
|
| 1196 |
2863d 04h |
werner |
/branches/iland_regen/src/ |
StandGPP debug output (instead of the missing StandNPP) output |
|
| 1194 |
2873d 07h |
werner |
/branches/iland_regen/src/ |
more documentation.... |
|
| 1193 |
2875d 13h |
werner |
/branches/iland_regen/src/ |
update version |
|
| 1190 |
2880d 03h |
werner |
/branches/iland_regen/src/ |
api documentation.... |
|
| 1184 |
2883d 10h |
werner |
/branches/iland_regen/src/ |
update JS documentation |
|
| 1183 |
2887d 06h |
werner |
/branches/iland_regen/src/ |
added new output with sapling details.
"version" in core folder. |
|
| 1182 |
2888d 04h |
werner |
/branches/iland_regen/src/ |
Torus also effective for seed distribution
new output "SaplingDetails" (super high detail level of individual cohorts)
version information also in ilandc [move version.cpp to core]
[due to a sync problem with the SVN server, some revisions where lost: here they are:]
compiling ilandc
some code clean up - removed old code (sapling.cpp) for sapling trees and establishment. |
|
| 1181 |
2905d 05h |
werner |
/branches/iland_regen/src/ |
include LDD packages even for N<1 (choose probabilistically)
visualizing seed input from javascript |
|
| 1180 |
2910d 04h |
werner |
/branches/iland_regen/src/ |
major rewrite of the seed distribution module:
* dispersal kernels fixed (using seeds per area, and not per radius)
* seed production now depends on leaf area of species (on source pixels)
* distribution for all source pixels (skipped the shortcut via continuously covered forest)
* probability of establishment calculated as function of available seedlings (sum of all incoming seedlings)
still testing ;)
more automation functions (e.g. to call OS commands, additional JS event handlers) |
|
| 1179 |
2912d 06h |
werner |
/branches/iland_regen/src/ |
GUI: visualizing seed maps
minor change in seed kernel calculation |
|
| 1178 |
2917d 04h |
werner |
/branches/iland_regen/src/ |
update the seed dispersal kernel: take the density of a point instead the density at a given radius
new option in the GUI to visualize newly created saplings
update of how sapling numbers are calculated and arrive in the output |
|
| 1177 |
2919d 05h |
werner |
/branches/iland_regen/src/ |
updating the sapling growth (calculation of stem numbers) |
|
| 1176 |
2922d 05h |
werner |
/branches/iland_regen/src/core/ |
developing the long distance dispersal functionality;
looks as if we have a conceptual problem with how we use the seed kernel functions...
more to come... |
|
| 1175 |
2929d 06h |
werner |
/branches/iland_regen/src/core/ |
testing change in the way the number of saplings is estimated (when several species reside on the same pixel) |
|
| 1174 |
2930d 05h |
werner |
/branches/iland_regen/src/ |
fixed a bug in the establishment / saplinggrowth debug outputs (bookkeeping) |
|
| 1172 |
2943d 12h |
werner |
/branches/iland_regen/src/ |
fixed nasty bug in fire module that caused crashes in release mode (but interestingly not in debug mode).
Reason: The ILAND_GUI #define is *not* visible when building the modules (fire, wind, barkbeetle); a conditional define in species.h has the effect that the structure (i.e. the memory address of some of the member properties) are different (specifically, the "mSeedDispersal" property). From the fire module, accessing the property resolved to a wrong memory address -> crash. Fix: moved the color-property (that is affected by the ILAND_GUI #define) to the end of the object.... |
|
| 1168 |
2951d 04h |
werner |
/branches/iland_regen/src/ |
working on serotony, establishment etc. updated new establishment module w.r.t. debug outputs. |
|
| 1167 |
2951d 13h |
werner |
/branches/iland_regen/ |
merged serotiny from trunk |
|
| 1165 |
2953d 03h |
werner |
/branches/iland_regen/src/ |
implementation of sprouting |
|
| 1164 |
2958d 05h |
werner |
/branches/iland_regen/src/ |
found unexpected behavior of irandom(): obviously, it return *never* the upper bound.
eg. irandom(0,3) -> values 0,1, or 2, but never 3.
changed calls to irandom() accordingly.
added also a better random selection of species in the establishment routine |
|
| 1163 |
2958d 10h |
werner |
/branches/iland_regen/src/ |
removed the "sapling.h" everywhere.
open:
* establishment: use better random order of species (e.g. by providing N random lists in speciesSet) |
|
| 1162 |
2958d 11h |
werner |
/branches/iland_regen/src/ |
removed the old "mSaplings" from resource unit/model.
Open Issues:
* ActPlanting [init/remove of saplings]
* MapGrid: retrieve list of saplings
* testing of standloader |
|
| 1161 |
2958d 13h |
werner |
/branches/iland_regen/src/core/ |
water limitation of establishment |
|
| 1160 |
2959d 04h |
werner |
/branches/iland_regen/src/core/ |
bug-fixes of the new establishment module (carbon)
first part of the YNP water limitation in establishment. |
|
| 1159 |
2960d 01h |
werner |
/branches/iland_regen/src/ |
Changed memory layout of regeneration module.
problems now with invalid (NaN) soil values. Needs further analysis ;) |
|
| 1158 |
2960d 07h |
werner |
/branches/iland_regen/src/ |
further performance improvements in regeneration/sapling module.
In total (sim 80 yrs WBT 2km2, from bare ground), iLand is +- 35% faster:
* seed dispersal (not today)
* optimized use of LRI-correction
* better linearization in sapling growth (height growth potential) |
|
| 1157 |
2960d 13h |
werner |
/branches/iland_regen/ |
merge of changes in the trunk (up to the version used for the 2016 DICE simulation batch). |
|
| 1118 |
3016d 10h |
werner |
/branches/iland_regen/src/core/ |
fixes for the new saplings, now it almost works as expected. |
|
| 1117 |
3018d 02h |
werner |
/branches/iland_regen/src/ |
including loading of saplings of snapshots.... |
|
| 1115 |
3021d 04h |
werner |
/branches/iland_regen/src/ |
integrating sapling growth, testing |
|
| 1114 |
3021d 05h |
werner |
/branches/iland_regen/src/ |
new output for tree removals ("landscape_removed"). |
|