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Rev Age Author Path Log message Diff
1181 2883d 04h werner /branches/iland_regen/src/ include LDD packages even for N<1 (choose probabilistically)

visualizing seed input from javascript
 
1180 2888d 02h werner /branches/iland_regen/src/ major rewrite of the seed distribution module:
* dispersal kernels fixed (using seeds per area, and not per radius)
* seed production now depends on leaf area of species (on source pixels)
* distribution for all source pixels (skipped the shortcut via continuously covered forest)
* probability of establishment calculated as function of available seedlings (sum of all incoming seedlings)
still testing ;)
more automation functions (e.g. to call OS commands, additional JS event handlers)
 
1179 2890d 04h werner /branches/iland_regen/src/ GUI: visualizing seed maps
minor change in seed kernel calculation
 
1178 2895d 02h werner /branches/iland_regen/src/ update the seed dispersal kernel: take the density of a point instead the density at a given radius
new option in the GUI to visualize newly created saplings
update of how sapling numbers are calculated and arrive in the output
 
1177 2897d 03h werner /branches/iland_regen/src/ updating the sapling growth (calculation of stem numbers)  
1176 2900d 03h werner /branches/iland_regen/src/core/ developing the long distance dispersal functionality;
looks as if we have a conceptual problem with how we use the seed kernel functions...
more to come...
 
1175 2907d 05h werner /branches/iland_regen/src/core/ testing change in the way the number of saplings is estimated (when several species reside on the same pixel)  
1174 2908d 03h werner /branches/iland_regen/src/ fixed a bug in the establishment / saplinggrowth debug outputs (bookkeeping)  
1172 2921d 11h werner /branches/iland_regen/src/ fixed nasty bug in fire module that caused crashes in release mode (but interestingly not in debug mode).
Reason: The ILAND_GUI #define is *not* visible when building the modules (fire, wind, barkbeetle); a conditional define in species.h has the effect that the structure (i.e. the memory address of some of the member properties) are different (specifically, the "mSeedDispersal" property). From the fire module, accessing the property resolved to a wrong memory address -> crash. Fix: moved the color-property (that is affected by the ILAND_GUI #define) to the end of the object....
 
1168 2929d 03h werner /branches/iland_regen/src/ working on serotony, establishment etc. updated new establishment module w.r.t. debug outputs.  
1167 2929d 11h werner /branches/iland_regen/ merged serotiny from trunk  
1165 2931d 02h werner /branches/iland_regen/src/ implementation of sprouting  
1164 2936d 04h werner /branches/iland_regen/src/ found unexpected behavior of irandom(): obviously, it return *never* the upper bound.
eg. irandom(0,3) -> values 0,1, or 2, but never 3.
changed calls to irandom() accordingly.
added also a better random selection of species in the establishment routine
 
1163 2936d 09h werner /branches/iland_regen/src/ removed the "sapling.h" everywhere.
open:
* establishment: use better random order of species (e.g. by providing N random lists in speciesSet)
 
1162 2936d 10h werner /branches/iland_regen/src/ removed the old "mSaplings" from resource unit/model.
Open Issues:
* ActPlanting [init/remove of saplings]
* MapGrid: retrieve list of saplings
* testing of standloader
 
1161 2936d 12h werner /branches/iland_regen/src/core/ water limitation of establishment  
1160 2937d 03h werner /branches/iland_regen/src/core/ bug-fixes of the new establishment module (carbon)

first part of the YNP water limitation in establishment.
 
1159 2937d 23h werner /branches/iland_regen/src/ Changed memory layout of regeneration module.
problems now with invalid (NaN) soil values. Needs further analysis ;)
 
1158 2938d 05h werner /branches/iland_regen/src/ further performance improvements in regeneration/sapling module.
In total (sim 80 yrs WBT 2km2, from bare ground), iLand is +- 35% faster:
* seed dispersal (not today)
* optimized use of LRI-correction
* better linearization in sapling growth (height growth potential)
 
1157 2938d 12h werner /branches/iland_regen/ merge of changes in the trunk (up to the version used for the 2016 DICE simulation batch).  

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