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Rev Age Author Path Log message Diff
1191 2877d 11h werner /branches/iland_regen/src/ more documentation .... phew  
1190 2880d 08h werner /branches/iland_regen/src/ api documentation....  
1189 2881d 15h werner /branches/iland_regen/src/apidoc/ documentation API iLand  
1188 2882d 11h werner /branches/iland_regen/src/apidoc/ apidoc style, and apidoc content  
1187 2883d 09h werner /branches/iland_regen/src/apidoc/node_modules/yuidoc-bootstrap-theme/assets/ apidocs CSS file updates  
1186 2883d 10h werner /branches/iland_regen/src/apidoc/node_modules/yuidoc-bootstrap-theme/assets/ update api-doc (yuidoc)  
1185 2883d 16h werner /branches/iland_regen/src/apidoc/node_modules/ added YUIdoc bootstrap-theme  
1184 2883d 16h werner /branches/iland_regen/src/ update JS documentation  
1183 2887d 12h werner /branches/iland_regen/src/ added new output with sapling details.
"version" in core folder.		  
1182 2888d 10h werner /branches/iland_regen/src/ Torus also effective for seed distribution
new output "SaplingDetails" (super high detail level of individual cohorts)
version information also in ilandc [move version.cpp to core]

[due to a sync problem with the SVN server, some revisions where lost: here they are:]
compiling ilandc

some code clean up - removed old code (sapling.cpp) for sapling trees and establishment.		  
1181 2905d 11h werner /branches/iland_regen/src/ include LDD packages even for N<1 (choose probabilistically)

visualizing seed input from javascript		  
1180 2910d 09h werner /branches/iland_regen/src/ major rewrite of the seed distribution module:
* dispersal kernels fixed (using seeds per area, and not per radius)
* seed production now depends on leaf area of species (on source pixels)
* distribution for all source pixels (skipped the shortcut via continuously covered forest)
* probability of establishment calculated as function of available seedlings (sum of all incoming seedlings)
still testing ;)
more automation functions (e.g. to call OS commands, additional JS event handlers)		  
1179 2912d 12h werner /branches/iland_regen/src/ GUI: visualizing seed maps
minor change in seed kernel calculation		  
1178 2917d 10h werner /branches/iland_regen/src/ update the seed dispersal kernel: take the density of a point instead the density at a given radius
new option in the GUI to visualize newly created saplings
update of how sapling numbers are calculated and arrive in the output		  
1177 2919d 10h werner /branches/iland_regen/src/ updating the sapling growth (calculation of stem numbers)  
1176 2922d 11h werner /branches/iland_regen/src/core/ developing the long distance dispersal functionality;
looks as if we have a conceptual problem with how we use the seed kernel functions...
more to come...		  
1175 2929d 12h werner /branches/iland_regen/src/core/ testing change in the way the number of saplings is estimated (when several species reside on the same pixel)  
1174 2930d 10h werner /branches/iland_regen/src/ fixed a bug in the establishment / saplinggrowth debug outputs (bookkeeping)  
1172 2943d 18h werner /branches/iland_regen/src/ fixed nasty bug in fire module that caused crashes in release mode (but interestingly not in debug mode).
Reason: The ILAND_GUI #define is *not* visible when building the modules (fire, wind, barkbeetle); a conditional define in species.h has the effect that the structure (i.e. the memory address of some of the member properties) are different (specifically, the "mSeedDispersal" property). From the fire module, accessing the property resolved to a wrong memory address -> crash. Fix: moved the color-property (that is affected by the ILAND_GUI #define) to the end of the object....		  
1170 2946d 11h werner /branches/iland_regen/src/ testing the grid-runners (etc) -- they seem to work fine, whew!
fixed a problem in the fire spread (never reached the right and bottom edge of a landscape).		  

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