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1203 2779d 17h werner /branches/iland_regen/src/ added the missing "ActPlanting" functions for the "new" regeneration module.  
1202 2800d 14h werner /branches/iland_regen/src/ searching/fixing issues with carbon cycle: NEP as provided by carbonflow output (NPP-Rh-Mgmt) is different from NEP as derived by the delta of the carbon stocks.
As usual, very hard to track down these issues, but:
* bark beetle module: foliage loss from BB-trees now correctly routed to soil
* order of modules in model: switched disturbances and carbon cylcle (in order to correctly track all carbon changes due to disturbances)
* fixed a problem with the calculation of NPP: after disturbances stand level NPP was set to 0 (since statistics were recalculated after disturbaces, but NPP values are not available then). Introduced: StandStatistics::clearOnlyTrees()
* flow from branches to the atmosphere (decay of branches) now tracked correctly (changes the NEP calulation).		  
1200 2825d 14h werner /branches/iland_regen/src/apidoc/iLand/ JS doc  
1198 2868d 14h werner /branches/iland_regen/src/ api documentation...  
1197 2868d 20h werner /branches/iland_regen/src/ilandc/ trying to compile on valinor server  
1196 2870d 13h werner /branches/iland_regen/src/ StandGPP debug output (instead of the missing StandNPP) output  
1195 2880d 16h werner /branches/iland_regen/src/ more documentaiton...  
1194 2880d 16h werner /branches/iland_regen/src/ more documentation....  
1193 2882d 22h werner /branches/iland_regen/src/ update version  
1192 2884d 08h werner /branches/iland_regen/src/apidoc/node_modules/yuidoc-bootstrap-theme/assets/ update doc  
1191 2884d 14h werner /branches/iland_regen/src/ more documentation .... phew  
1190 2887d 12h werner /branches/iland_regen/src/ api documentation....  
1189 2888d 18h werner /branches/iland_regen/src/apidoc/ documentation API iLand  
1188 2889d 14h werner /branches/iland_regen/src/apidoc/ apidoc style, and apidoc content  
1187 2890d 13h werner /branches/iland_regen/src/apidoc/node_modules/yuidoc-bootstrap-theme/assets/ apidocs CSS file updates  
1186 2890d 13h werner /branches/iland_regen/src/apidoc/node_modules/yuidoc-bootstrap-theme/assets/ update api-doc (yuidoc)  
1185 2890d 19h werner /branches/iland_regen/src/apidoc/node_modules/ added YUIdoc bootstrap-theme  
1184 2890d 19h werner /branches/iland_regen/src/ update JS documentation  
1183 2894d 15h werner /branches/iland_regen/src/ added new output with sapling details.
"version" in core folder.		  
1182 2895d 13h werner /branches/iland_regen/src/ Torus also effective for seed distribution
new output "SaplingDetails" (super high detail level of individual cohorts)
version information also in ilandc [move version.cpp to core]

[due to a sync problem with the SVN server, some revisions where lost: here they are:]
compiling ilandc

some code clean up - removed old code (sapling.cpp) for sapling trees and establishment.		  

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