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/********************************************************************************************
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**    iLand - an individual based forest landscape and disturbance model
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**    http://iland.boku.ac.at
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**    Copyright (C) 2009-  Werner Rammer, Rupert Seidl
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**
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**    This program is free software: you can redistribute it and/or modify
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**    it under the terms of the GNU General Public License as published by
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**    the Free Software Foundation, either version 3 of the License, or
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**    (at your option) any later version.
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**
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**    This program is distributed in the hope that it will be useful,
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**    but WITHOUT ANY WARRANTY; without even the implied warranty of
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**    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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**    GNU General Public License for more details.
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**
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**    You should have received a copy of the GNU General Public License
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**    along with this program.  If not, see <http://www.gnu.org/licenses/>.
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********************************************************************************************/
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#ifndef SAPLINGS_H
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#define SAPLINGS_H
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#include "grid.h"
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#include "snag.h"
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#include <QRectF>
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class ResourceUnitSpecies; // forward
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class ResourceUnit; // forward
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struct SaplingTree {
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    SaplingTree() { clear(); }
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    short unsigned int age;  // number of consectuive years the sapling suffers from dire conditions
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    short signed int species_index; // index of the species within the resource-unit-species container
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    unsigned char stress_years; // number of consecutive years that a sapling suffers from stress
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    unsigned char flags; // flags, e.g. whether sapling stems from sprouting
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    float height; // height of the sapling in meter
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    bool is_occupied() const { return height>0.f; }
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    void clear()  {  age=0; species_index=-1; stress_years=0; flags=0; height=0.f;  }
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    void setSapling(const float h_m, const int age_yrs, const int species_idx) { height=h_m;
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                                                                                 age=static_cast<short unsigned int>(age_yrs);
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                                                                                 stress_years=0;
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                                                                                 species_index=static_cast<short signed int>(species_idx); }
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    // flags
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    bool is_sprout() const { return flags & 1; }
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    void set_sprout(const bool sprout) {if (sprout) flags |= 1; else flags &= (1 ^ 0xffffff ); }
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    // get resource unit species of the sapling tree
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    ResourceUnitSpecies *resourceUnitSpecies(const ResourceUnit *ru);
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};
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#define NSAPCELLS 5
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struct SaplingCell {
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    enum ECellState { CellInvalid=0, CellFree=1, CellFull=2};
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    SaplingCell() {
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        state=CellInvalid;
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    }
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    ECellState state;
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    SaplingTree saplings[NSAPCELLS];
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    void checkState() { if (state==CellInvalid) return;
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                        bool free = false;
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                        for (int i=0;i<NSAPCELLS;++i) {
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                            // locked for all species, if a sapling of one species >1.3m
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                            if (saplings[i].height>1.3f) {state = CellFull; return; }
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                            // locked, if all slots are occupied.
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                            if (!saplings[i].is_occupied())
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                                free=true;
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                        }
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                        state = free? CellFree : CellFull;
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                      }
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    /// get an index to an open slot in the cell, or -1 if all slots are occupied
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    int free_index() {
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        for (int i=0;i<NSAPCELLS;++i)
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            if (!saplings[i].is_occupied())
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                return i;
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        return -1;
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    }
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    /// count the number of occupied slots on the pixel
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    int n_occupied() {
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        int n=0;
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        for (int i=0;i<NSAPCELLS;++i)
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            n+=saplings[i].is_occupied();
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        return n;
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    }
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    /// add a sapling to this cell, return a pointer to the tree on success, or 0 otherwise
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    SaplingTree *addSapling(const float h_m, const int age_yrs, const int species_idx) {
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        int idx = free_index();
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        if (idx==-1)
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            return 0;
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        saplings[idx].setSapling(h_m, age_yrs, species_idx);
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        return &saplings[idx];
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    }
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    /// return the maximum height on the pixel
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    float max_height() { if (state==CellInvalid) return 0.f;
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                         float h_max = 0.f;
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                         for (int i=0;i<NSAPCELLS;++i)
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                             h_max = std::max(saplings[i].height, h_max);
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                         return h_max;
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                       }
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    bool has_new_saplings() { if (state==CellInvalid) return 0.f;
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                        for (int i=0;i<NSAPCELLS;++i)
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                            if (saplings[i].is_occupied() && saplings[i].age<2)
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                                return true;
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                        return false;
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    }
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    /// return the sapling tree of the requested species, or 0
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    SaplingTree *sapling(int species_index) {
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        if (state==CellInvalid) return 0;
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        for (int i=0;i<NSAPCELLS;++i)
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            if (saplings[i].species_index == species_index)
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                return &saplings[i];
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        return 0;
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    }
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};
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class ResourceUnit;
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class Saplings;
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/** The SaplingStat class stores statistics on the resource unit x species level.
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 */
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class SaplingStat
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{
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public:
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    SaplingStat() { clearStatistics(); }
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    void clearStatistics();
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    /// calculate statistics (and carbon flows) for the saplings of species 'species' on 'ru'.
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    void calculate(const Species *species, ResourceUnit *ru);
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    // actions
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    void addCarbonOfDeadSapling(float dbh) { mDied++; mSumDbhDied+=dbh;  }
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    // access to statistics
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    int newSaplings() const { return mAdded; }
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    int diedSaplings() const { return mDied; }
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    int livingCohorts() const { return mLiving; } ///< get the number of cohorts
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    double livingSaplings() const { return mLivingSaplings; }
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    double livingSaplingsSmall() const { return mLivingSmallSaplings; }
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    int recruitedSaplings() const { return mRecruited; }
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    ///  returns the *represented* (Reineke's Law) number of trees (N/ha) and the mean dbh/height (cm/m)
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    double livingStemNumber(const Species *species, double &rAvgDbh, double &rAvgHeight, double &rAvgAge) const;
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    double averageHeight() const { return mAvgHeight; }
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    double averageAge() const { return mAvgAge; }
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    double averageDeltaHPot() const { return mAvgDeltaHPot; }
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    double averageDeltaHRealized() const { return mAvgHRealized; }
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    // carbon and nitrogen
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    const CNPair &carbonLiving() const { return mCarbonLiving; } ///< state of the living
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    const CNPair &carbonGain() const { return mCarbonGain; } ///< state of the living
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private:
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    int mAdded; ///< number of tree cohorts added
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    int mRecruited; ///< number of cohorts recruited (i.e. grown out of regeneration layer)
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    int mDied; ///< number of tree cohorts died
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    double mSumDbhDied; ///< running sum of dbh of died trees (used to calculate detritus)
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    int mLiving; ///< number of trees (cohorts!!!) currently in the regeneration layer
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    double mLivingSaplings; ///< number of individual trees in the regen layer (using Reinekes R), with h>1.3m
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    double mLivingSmallSaplings; ///< number of individual trees of cohorts < 1.3m height
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    double mAvgHeight; ///< average height of saplings (m)
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    double mAvgAge; ///< average age of saplings (years)
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    double mAvgDeltaHPot; ///< average height increment potential (m)
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    double mAvgHRealized; ///< average realized height increment
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    CNPair mCarbonLiving; ///< kg Carbon (kg/ru) of saplings
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    CNPair mCarbonGain; ///< net growth (kg / ru) of saplings
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    friend class Saplings;
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};
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/** The Saplings class the container for the establishment and sapling growth in iLand.
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 *
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*/
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class Saplings
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{
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public:
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    Saplings();
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    void setup();
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    void calculateInitialStatistics(const ResourceUnit *ru);
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    // main functions
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    void establishment(const ResourceUnit *ru);
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    void saplingGrowth(const ResourceUnit *ru);
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    // access
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    /// return the SaplingCell (i.e. container for the ind. saplings) for the given 2x2m coordinates
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    /// if 'only_valid' is true, then 0 is returned if no living saplings are on the cell
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    /// 'rRUPtr' is a pointer to a RU-ptr: if provided, a pointer to the resource unit is stored
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    SaplingCell *cell(QPoint lif_coords, bool only_valid=true, ResourceUnit **rRUPtr=0);
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    /// clear/kill all saplings within the rectangle given by 'rectangle'.
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    /// If 'remove_biomass' is true, then the biomass is extracted (e.g. burnt), otherwise they are moved to soil
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    void clearSaplings(const QRectF &rectangle, const bool remove_biomass);
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    /// clear all saplings on a given cell 's' (if 'remove_biomass' is true: biomass removed from system (e.g. burnt))
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    void clearSaplings(SaplingCell *s, ResourceUnit *ru, const bool remove_biomass);
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    /// generate vegetative offspring from 't' (sprouts)
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    int addSprout(const Tree *t);
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    static void setRecruitmentVariation(const double variation) { mRecruitmentVariation = variation; }
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    static void updateBrowsingPressure();
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private:
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    bool growSapling(const ResourceUnit *ru, SaplingCell &scell, SaplingTree &tree, int isc, float dom_height, float lif_value, int cohorts_on_px);
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    //Grid<SaplingCell> mGrid;
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    static double mRecruitmentVariation;
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    static double mBrowsingPressure;
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};
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/** SaplingCellRunner is a helper class to access all SaplingCell that
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 * are located on a given "stand" (in the stand grid)
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  */
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class MapGrid; // forward
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class SaplingCellRunner
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{
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public:
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    SaplingCellRunner(const int stand_id, const MapGrid *stand_grid=0);
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    ~SaplingCellRunner();
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    SaplingCell *next();
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    ResourceUnit *ru() const { return mRU; }
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    QPointF currentCoord() const;
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private:
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    GridRunner<float> *mRunner;
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    ResourceUnit *mRU;
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    const MapGrid *mStandGrid;
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    int mStandId;
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};
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#endif // SAPLINGS_H